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Detailed information on CNT30592819


BLAST search results

BLAST vs Swiss-Prot:
sp|P69326|UBIQ_WHEAT, E-value = 1e-47

BLAST vs NONCODE:
NONSTUT000620, E-value = 2e-24

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671166Eragrostis curvulaSetaria viridis39.6657.8692.67232forward
CNT30299368Eragrostis curvulaTriticum aestivum39.6649.8993.53232forward
CNT30253996Eragrostis curvulaAvena sativa39.6630.2594.4232forward
CNT30666113Eragrostis curvulaTriticum dicoccoides39.6646.1293.53232forward
CNT30649899Eragrostis curvulaRosa chinensis38.832.4792.51227forward
CNT30495775Eragrostis curvulaDigitaria exilis39.8343.892.27233forward

Expression of CNT30592819

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MSLCWSGGMPSLSWILALTLSMVSEDSTSRVMVLPVRVFTKIC

>peptide 2 (75 aa)
MEPNSTTTQPTSLTSKRTPFRTPDIIGTRRPRYSSSFNQRSTDHHGGGAPGGGWTPSGCCSQRGCGRPRAACQRR*

Sequence

>CNT30592819
CTAGCACACGGCCATAACAGAACTAATAAAATTCGGATGAAACTGAACAGAGCACAAAAAAACCTAATCAATCCACAAGAATAATTTCACTAGTAGCACC
AACCATAACAGAATTAAAAATCAGACAGATGAAACTGAACAGAGCACAAATATAGTTCAAACGTCACTTATTAAACTGCTGCACCTCTGCAATTGTTTCT
GAGTACGACATAACCACAAAGGACTCAGTACATGGAACCAAACAGCACTACGACACAACCCACAAGCTTAACTTCAAAGAGGACACCCTTCAGGACACCA
GATATCATAGGCACCAGGCGACCAAGGTACAGCAGCAGCTTCAACCAGCGTTCTACTGACCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTT
CTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATC
TTAGCCTTGACGTTGTCAATGGTGTCGGAGGATTCCACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCA