Detailed information on CNT30495775


BLAST search results

BLAST vs Swiss-Prot:
sp|P69326|UBIQ_WHEAT, E-value = 1e-48

BLAST vs NONCODE:
NONSTUT000620, E-value = 7e-21

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671166Digitaria exilisSetaria viridis53.5771.0790.88285forward
CNT30190524Digitaria exilisSecale cereale44.1749.7991.91235forward
CNT30252634Digitaria exilisAvena sativa44.1746.1794.47235forward
CNT30667751Digitaria exilisTriticum dicoccoides43.849.7992.7233forward
CNT30686462Digitaria exilisTriticum urartu45.1112.8892.92240forward
CNT30364386Digitaria exilisSorghum bicolor48.8749.3493.85260forward
CNT30592819Digitaria exilisEragrostis curvula43.839.8392.27233forward

Expression of CNT30495775

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MSLCWSGGMPSLSWILALTLSMVSEDSTSRVMVLPVRVLTKICICRRVTKHVSI*

>peptide 2 (93 aa)
MTDGLLTTTETEHQVEGALLLDVVVRKGAAILQLLASKDEPLLVRRDALLVLDLGFDVVDGVGRLHLKGDGLAGEGLNEDLHLQKSNQTCKHLA

>peptide 3 (33 aa)
MKHSFDTAQITTLQRQTPFMARDRTTKLQQQLQ*

Sequence

>CNT30495775
CGGCCAATGTAAGCTAGAACAGGCAAAATAAAAAACCATAAGAAATATTAACAGAGCACAGATTTTAGTTCACACATCATTTATTCATGCATAAGCGGCT
GAACCACAGGTCCACAGCAATGGTTTCAGATAAACCCACAGCAACCAGTTCATGAAACACAGTTTCGACACAGCACAGATAACGACACTTCAAAGACAAA
CACCCTTCATGGCCAGAGACCGGACGACCAAGCTACAGCAGCAGCTTCAATGACTGATGGCCTACTGACCACCACGGAGACGGAGCACCAGGTGGAGGGT
GCTCTCCTTCTGGATGTTGTAGTCCGCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCCGGAGGGATGCCCTCCTTG
TCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCATCTGCA
GAAGAGTAACCAAACATGTAAGCATCTAGCAG