Detailed information on CNT30591783


BLAST search results

BLAST vs Swiss-Prot:
sp|Q41238|LOX16_SOLTU, E-value = 2e-54

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678051Musa acuminataSetaria viridis405182.81128forward
CNT30224984Musa acuminataHordeum vulgare3036.2385.4296forward
CNT30394048Musa acuminataTriticum turgidum31.5612.9384.16101forward
CNT30247013Musa acuminataAvena sativa40.3117.3483.72129forward
CNT30666056Musa acuminataTriticum dicoccoides38.4412.9586.18123forward
CNT30594688Musa acuminataEragrostis curvula41.8845.1284.33134forward

Expression of CNT30591783

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MMVVQVLASSARVCILGHQSSSFLSPWPTSRTSFHQACSSTSA

>peptide 2 (53 aa)
RDRTSMSDTPRMVWNWLVMVFRNARSGFFSSSWYSGVPGSGMNRRLMVGRLGR*

Sequence

>CNT30591783
GGCGCGACAGGACCTCGATGAGTGACACGCCGAGGATGGTCTGGAACTGGCTGGTGATGGTCTTCAGGAACGCTAGGTCCGGGTTCTTCTCCAGCTCGTG
GTACTCCGGCGTGCCCGGCTCGGGCATGAACCGCCGACTGATGGTGGGCCGGTTGGGGAGGTAGCCAGCGTAGGGGGCGGAGGCCACCCAGATGATGGTG
GTACAGGTCTTGGCCAGCTCCGCCAGGGTCTGCATCTTGGGCCACCAATCCTCGTCCTTCTTGTCGCCGTGGCCGACCTCGCGGACCTCCTTCCACCAGG
CCTGCAGCTCGACATCGGCC