Detailed information on CNT30594688


BLAST search results

BLAST vs Swiss-Prot:
sp|P29250|LOX2_ORYSJ, E-value = 2e-52

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692296Eragrostis curvulaOryza sativa73.7428.0180.82219forward
CNT3020541Eragrostis curvulaCitrullus lanatus24.5829.6789.0473forward
CNT30591783Eragrostis curvulaMusa acuminata45.1241.8884.33134forward
CNT30136376Eragrostis curvulaLolium perenne21.2121.1485.7163forward
CNT30329931Eragrostis curvulaDioscorea rotundata28.6214.4383.5385forward

Expression of CNT30594688

Peptides detected in this lncRNA

>peptide 1 (54 aa)
CARTPSPGCVPAPRTSPCPASASAAGSRTAGSGGTRRTGTARSSRPRAARRPSR*

>peptide 2 (98 aa)
GAHEHLLRVAFQLRVPLRVRLRHRQPAHGRPVREVPGVRVLPEVHGRVQRGGRPDDGGAGLDQLRHSLHRGPPRRVLDVCVPDLAQLLPPRLQLRVGTQ

>peptide 3 (97 aa)
VRTNTFSGLRSSSAYLSVSGFGIGSRLTDGRFGRYPAYGYCPKFTAACSAEAVQMMVAQALTSSGTVCIVGHHAASLMSACPTSRSSFHHACSSVSAR

Sequence

>CNT30594688
GGTGCGCACGAACACCTTCTCCGGGTTGCGTTCCAGCTCCGCGTACCTCTCCGTGTCCGGCTTCGGCATCGGCAGCCGGCTCACGGACGGCCGGTTCGGG
AGGTACCCGGCGTACGGGTACTGCCCGAAGTTCACGGCCGCGTGCAGCGCGGAGGCCGTCCAGATGATGGTGGCGCAGGCCTTGACCAGCTCCGGCACAG
TCTGCATCGTGGGCCACCACGCCGCGTCCTTGATGTCTGCGTGCCCGACCTCGCGCAGCTCCTTCCACCACGCCTGCAGCTCCGTGTCGGCACGCAG