Detailed information on CNT30224984


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692296Hordeum vulgareOryza sativa36.2312.2887.596forward
CNT30678051Hordeum vulgareSetaria viridis34.7236.6584.7892forward
CNT30591783Hordeum vulgareMusa acuminata36.233085.4296forward
CNT30440717Hordeum vulgareAegilops tauschii56.633.9494150forward
CNT30250756Hordeum vulgareAvena sativa43.7716.8687.07116forward
CNT30454858Hordeum vulgareSaccharum spontaneum42.6443.882.3113forward
CNT304788Hordeum vulgareZea mays26.0415.9488.4169forward
CNT30594693Hordeum vulgareEragrostis curvula44.5329.0690.68118forward

Expression of CNT30224984

Peptides detected in this lncRNA

>peptide 1 (87 aa)
AHALISSATVCIFGHHAASLRSPCPTSLTSFHHACSSTSPWISGELSSMATGASVPSPRRKSSVLVAYTKLASRLLMSIRNGIRLSCW

>peptide 2 (87 aa)
GARLDQLRHRLHLWPPRRVLEVAVPDLPHLLPPRLQLHVALDQRRAQLDGDRRQRAVPSQEEQRPCGVHEAGVEVVDVDQERHQVVVL

Sequence

>CNT30224984
GGCGCACGCCTTGATCAGCTCCGCCACCGTCTGCATCTTTGGCCACCACGCCGCGTCCTTGAGGTCGCCGTGCCCGACCTCCCTCACCTCCTTCCACCAC
GCCTGCAGCTCCACGTCGCCCTGGATCAGCGGCGAGCTCAGCTCGATGGCGACCGGCGCCAGCGTGCCGTCCCCTCGCAGGAAGAGCAGCGTCCTTGTGG
CGTACACGAAGCTGGCGTCGAGGTTGTTGATGTCGATCAGGAACGGCATCAGGTTGTCGTGCTGG