Detailed information on CNT30572846


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43191|LOX15_SOLTU, E-value = 2e-95

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3071772Vitis viniferaQuercus suber22.0711.5684.06207forward
CNT30382166Vitis viniferaManihot esculenta19.423.7983.52182forward
CNT3042803Vitis viniferaPrunus dulcis23.3515.782.65219forward
CNT3095860Vitis viniferaSolanum tuberosum24.0921.7784.51226forward
CNT30569104Vitis viniferaActinidia chinensis14.0752.1785.61132forward
CNT30508605Vitis viniferaSolanum lycopersicum23.1393.5379.26217forward
CNT30599437Vitis viniferaFraxinus excelsior19.1940.8280180forward
CNT3025614Vitis viniferaPopulus trichocarpa24.261.0282.38227forward

Expression of CNT30572846

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MEPSTPFSAGVYTLLTAPNLSPLGCGRLNSIASGFKVPSSFRKRRVLEA*

>peptide 2 (43 aa)
MQKLVNWMKHAELPVGCNHKWLNCSMCIQPATNIKDIHNPLQI*

>peptide 3 (33 aa)
MAYFDGKTVLSTTPPALMRICRANAFIFIVSRK*

>peptide 4 (42 aa)
MIARVIHSSISFSQLPNGTFNTIFSWRIYFVDSSKFIPTRMW*

Sequence

>CNT30572846
GCTTGCTCAGTAAGAACCCAGTCTTTGTAAACAACAGATGACATTTCCATGGCATACTTTGATGGAAAAACTGTGCTCTCCACCACTCCACCAGCATTGA
TGAGGATTTGTCGAGCTAATGCATTTATATTCATCGTATCACGGAAGTGAGGATGCAAAAGCTTGTGAATTGGATGAAGCACGCTGAGCTGCCTGTTGGT
TGCAATCACAAATGGCTCAATTGCAGCATGTGTATTCAACCTGCAACCAACATCAAAGATATTCATAACCCGCTTCAGATTTAAGCCCAAACTGTATTCA
CTTTCCTTTGGGATATTACATACCAGTGGCTGAGGAGCTGATGATAGCCAGAGTCATTCACAGCAGCATAAGCTTTAGCCAGCTGCCAAATGGAACCTTC
AACACCATTTTCAGCTGGCGTATATACTTTGTTGACAGCTCCAAATTTATCCCCACTAGGATGTGGTAGGCTCAATTCAATCGCCAGCGGCTTCAAAGTT
CCGTCGTCTTTCAGGAAGAGGAGAGTCCTTGAGGCATAAGTTTTCGTGGAAGTTGTGTTTATCCTCCTCAGGTATGGCATGAAAACATCATGGTGATCTA
ATATGAATAGCCTCTTCTTCTCCATTGCCTAGTAAAAAGCACCATTTTTCAGTTACTATGGCTTGTGTTCCAATGCAAAAAATTAACATGTCGACATTGA
AAAATTTAGTTTGAAAGAACGGAACCTAAGAGCGTTACCTCGTTTATAGTAAGGTCATCCAGGTGATTCTCTATGTGTTCTTTGGTTATTGAACTGTTTT
GGTTGCCATAAACTTCAGGATCCAGCTTGCTTTTTGGAGGAAACTCCTTCAAACAAAGTAGAAAGAGCCAATAATTATCAGAAAAGAGCTAGAACAGTAG
ATGGAGGGAAAGAAAACAAAGTCTGGAAGCCTTTCCAA