Detailed information on CNT3071772


BLAST search results

BLAST vs Swiss-Prot:
sp|Q41238|LOX16_SOLTU, E-value = 6e-107

BLAST vs NONCODE:
NONCSAT002150, E-value = 2e-18

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550000Quercus suberIpomoea triloba5.7540.3987.38103forward
CNT30564842Quercus suberActinidia chinensis11.892284.04213forward
CNT30599437Quercus suberFraxinus excelsior11.5646.9482.61207forward
CNT30650744Quercus suberRosa chinensis13.6226.7585.66244forward
CNT30431245Quercus suberPapaver somniferum16.3631.479.86293forward
CNT30572846Quercus suberVitis vinifera11.5622.0784.06207forward
CNT30704118Quercus suberPrunus avium18.240.2580.37326forward
CNT3030662Quercus suberTheobroma cacao13.0726.8784.19234forward
CNT3024461Quercus suberPopulus trichocarpa17.5948.5482.22315forward

Expression of CNT3071772

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MAYFAGKTVRSSTPPALMRICRAKAFIFIVSRKWGCKSLCIG*

>peptide 2 (43 aa)
MKGRSHPYDNGACLDKLSSCLHLRPPWLIFLVTMPLIADLHPP*

>peptide 3 (39 aa)
MAHLSCHHAPHCGSPSTIIGVQSHFGPYHQLDSRKNNIH*

>peptide 4 (65 aa)
MGMQKLMYWMKHTQLSICCNYKRLYYSMGVQPANSQMHLDILTRSQSSFYLLLSCSNFLRHHTSG*

>peptide 5 (50 aa)
MIMVHAWISSARVFISGHHGSSFLSPCPSLRISIHHNWSSESFWTISSVG*

>peptide 6 (44 aa)
MLLVVQHLKSTQEYLSAQDKSHQLNAGTKFLSVIHQGGFETVLL*

Sequence

>CNT3071772
AGTCACAGAAATAGAGTGAGAAAAACTAGCCAAAATTGACAGATAGAAGCTTTCTTTCAGCTTATTGTTGATGATGTTGTGAACGTGATTGGTAGCCTTT
GCCACAAGTGATTAACCAGCTCCCATGTCTCCAAATCTCATCGCATGAAGCCATAAAGCTTATTTCCAAATTTCTCAAATGCTGCTAGTGGTTCAGCATC
TGAAGTCCACTCAGGAGTATCTCTCTGCCCAAGATAAATCTCATCAGTTGAATGCCGGGACAAAATTTCTATCAGTGATACACCAAGGAGGGTTTGAAAC
TGTGCTGTTATAGTTTTCAGGAAGGCTACTTCAGGTTTTGACTCAAGTTCCACATACTCAGGGGTGCCTGGCTCAGGCATGAAGCGGCGGCTTACAGTTG
GGCGATTAGGAAGATAGCCAGCATAAGGGTATTGCCCAAAATTCACAGCTGCATGAAGGGCAGAAGCCACCCATATGATAATGGTGCATGCTTGGATAAG
CTCAGCTCGTGTCTTCATCTCAGGCCACCATGGCTCATCTTTCTTGTCACCATGCCCCTCATTGCGGATCTCCATCCACCATAATTGGAGTTCAGAGTCA
TTTTGGACCATATCATCAGTTGGATAGTAGAAAAAACAATATTCACTAACCCAATTCTCAATTGCTGACCAGATCTCTAGCCCATCAACAGCATAGGGAT
AATCCTCTATCAGAAGTCTGAGGCCGTGGCGGCAGCGTGAGTCTGGAACTGCCATTCCTCTAAAATGAATCAAAAGTGGATCAAAATTTGTTCTGATAAA
TATTAAAACTATAGAAATCATTAAAAAGACAGTGCTTTGCACACCTTTTGAGCAGTTCATTAGGTAATGCCTGTTCAGTGAACACCCAGTTCTTATATAA
AACAGCAGACATCTCCATGGCGTATTTTGCTGGGAAGACTGTTCGCTCAAGCACCCCACCAGCATTGATGAGGATCTGCCGAGCCAAGGCATTTATATTC
ATTGTGTCCCGGAAATGGGGATGCAAAAGCTTATGTATTGGATGAAGCACACTCAGCTGTCTATTTGTTGCAATTACAAACGGCTCTATTACAGCATGGG
TGTTCAACCTGCAAATAGTCAGATGCATTTAGATATCCTTACTCGATCACAGTCAAGTTTCTACCTTTTGTTATCATGCAGTAATTTTCTTAGGCATCAT
ACCAGTGGCTAATAAGCTGGTGGTAGCCAGAATCATTAACAGCAGCATAAGCTTTGGCCAGCTGCCACACCGAACCTTCAACACCTTCTTCTGCTGGAGT
GAAAACTTTACTGACAGCACCATGGCGTTCCCCTTGTGGATGCGGCAAGCTTAACTCAATTGCCAACGGCTTTAGTGTCCCATTATCTTGCAGTAAAAGG
AGCGTTCTGGTGGCATAAGTCTTTGTGGTGGTTGAGTTTATTCTCATCAGGTATGGCATTAGTGCATCATGATGATCTAATATAAACAGCCTGTTGTTTC
TAATTGCCTAGAACAAGAAAATAGAAATTGGTTATCAATGTAGAACAAAGTATAGTAACATATTTTGGATGTCATATTGGATATATGATGTAGACATAGT
CAGAAACATAAGAATGATCAATACTTGATCTACAGTCAGCCCATTCAGGTTCTTCTCTATGTGTTCTTCTGTTATTGCACTGTTTTGATTCCCATATTCT
TTAGGGTCTAGATTGCTGGTTGGGGGGAATTCCTGCAGACAACATCCCAGTAAAATGTTGAAGCAACAAACCATTTAACATCATTTAGCAA