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Detailed information on CNT30569104


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43191|LOX15_SOLTU, E-value = 1e-24

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30709447Actinidia chinensisGlycine max20.9514.888.6853forward
CNT3042803Actinidia chinensisPrunus dulcis32.815.9586.7583forward
CNT3095396Actinidia chinensisSolanum tuberosum25.693.7186.1565forward
CNT30508605Actinidia chinensisSolanum lycopersicum20.5522.4188.4652forward
CNT30572846Actinidia chinensisVitis vinifera52.1714.0785.61132forward
CNT3025614Actinidia chinensisPopulus trichocarpa33.9923.1286.0586forward

Expression of CNT30569104

Peptides detected in this lncRNA

>peptide 1 (83 aa)
VYTSLTSPNLSSSGCGRLISIASGFKVPSFFKKRSVLVAYIFVEVEFIRLKYGIRISWLNQRTCEAAATARKGNKGLKFKRERE

Sequence

>CNT30569104
GTGTACACTTCACTAACTTCTCCTAATTTATCGTCCTCTGGGTGTGGCAGGCTCATTTCAATTGCCAGTGGCTTCAAAGTTCCATCATTTTTCAAGAAGA
GGAGTGTCCTTGTGGCATATATCTTCGTGGAAGTTGAGTTTATCCGCCTCAAGTATGGCATCAGAATATCATGGCTGAATCAAAGAACCTGTGAAGCAGC
AGCAACAGCAAGAAAAGGAAATAAAGGATTGAAGTTTAAGAGAGAGAGAGAGA