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Detailed information on CNT30382166


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30710995Manihot esculentaGlycine max7.8424.2986.6760forward
CNT3042803Manihot esculentaPrunus dulcis21.3111.6882.82163forward
CNT30599437Manihot esculentaFraxinus excelsior12.8122.2284.6998forward
CNT30572846Manihot esculentaVitis vinifera23.7919.483.52182forward
CNT3025614Manihot esculentaPopulus trichocarpa25.151.6182.81192forward

Expression of CNT30382166

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MPESITATYALASCHMEPSMPCSAGVHTLLMAPSLSPSG*

>peptide 2 (38 aa)
MDVISMAYFAGNTVNSNNPPALISVCLATAFMFIVSRK*

>peptide 3 (30 aa)
MPICCNHKWLDRCMGVQPMKKISYQWLISW*

>peptide 4 (66 aa)
MARSLHGCATYEENFIPVADKLVNARINYSHICFSQLPYGTFNAMLSWCAYFANGTEFISLRMRQA*

Sequence

>CNT30382166
GAAAGTTTACGACCCATTATTGGATTGAGATTAATTTACCTCTTAATTAGATCCTGAGGGAGTGCTTGCTCAGTGAAATTCCAGCTTTTGTAAGCCATGG
ATGTCATTTCCATGGCATACTTTGCCGGAAATACTGTAAACTCCAACAATCCACCAGCATTAATTAGTGTTTGTCTAGCCACTGCATTTATGTTCATTGT
GTCCCGGAAGTGAGGTTGCAGAAGTTTGTATATTGGATGAAGCACACTTAGATGCCTATTTGTTGCAATCACAAATGGCTCGATCGCTGCATGGGTGTGC
AACCTATGAAGAAAATTTCATACCAGTGGCTGATAAGCTGGTGAATGCCAGAATCAATTACAGCCACATATGCTTTAGCCAGTTGCCATATGGAACCTTC
AATGCCATGCTCAGCTGGTGTGCATACTTTGCTAATGGCACCGAGTTTATCTCCCTCAGGATGAGGCAAGCTTAATTCGATCGCAAGAGGCTTAAGAGTA
CCATCATCTTTCAAGAAAAGTAGGGTCCTGGTTGCATATGTCTTTGTGGAAGTAGCATTTATCCGCCTCAGATTGCTTTCTGGAGGGAATTCCTGCAGTA
AAATTTAGTTTTAGGCATCAACTTCCTGTCTGTAACGGGTGAAATTGGAAGGAAACGAAGGTTTGACATCCATTATAATTTTCCTAAGTCAATTCTATAC
AAACCTTCATGGCAAACAATAAGGGAAAAAGTGCTTCAATACCTCGAGACAACGAATGATGACAG