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Detailed information on CNT3095860


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43190|LOX14_SOLTU, E-value = 2e-142

BLAST vs NONCODE:
NONSTUT002800, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550000Solanum tuberosumIpomoea triloba17.3470.5983.89180forward
CNT30620387Solanum tuberosumCajanus cajan17.4425.680.66181forward
CNT30431245Solanum tuberosumPapaver somniferum24.1826.978.09251forward
CNT30572846Solanum tuberosumVitis vinifera21.7724.0984.51226forward
CNT30704118Solanum tuberosumPrunus avium33.1442.4779.07344forward
CNT3031005Solanum tuberosumTheobroma cacao13.4925.0485.71140forward

Expression of CNT3095860

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MMVVHESISSCGVSISGMNLRLTVGRFGR*

>peptide 2 (33 aa)
MANLDGKTVLSRTPPALIRICLAIALIFIVSRK*

>peptide 3 (36 aa)
MFLYNVSFDGAYCIVPLNKISRKGLIRENPIFVNDS*

>peptide 4 (42 aa)
MSHFSEFLPPGLEFIVFQNLFVRSIVEAAVVCHPTFDCRPYF*

>peptide 5 (43 aa)
MVHFSCHHVPLLGVPSTRLGVHCLSESLRPIHSRSCSSLSPNF*

>peptide 6 (50 aa)
MMVVHESISSCGVSISGHHGSFFLSPCPTSRSSFHQAWSSLSFRISSSDP*

Sequence

>CNT3095860
GTCCGAGGTAAATCTCATCTGTAGTATGCCTTGACAATATCTCTACGAGGGAAACACCAAGCAATGTTTGTAACTGAGCTGTGATTGTTTTCAAGAATGC
CTTATCGGGGTTTTTCTTTAGCTCTTCATATTCAGGAGTTCCTGGTTCAGGCATGAATCTTCGACTTACTGTGGGGCGATTTGGGAGGTAACCTGCATAA
GGATATTGCCCAAAATTAACTGCTGCATGAAGTGCAGAAGCTATCCATATGATGGTGGTACACGAATCGATTAGCTCTTGTGGTGTTTCCATTTCAGGCA
TGAATCTTCGACTTACTGTGGGGCGATTTGGGAGGTAACCTGCATAAGGATATTGCCCAAAATTAACTGCTGCATGAAGTGCAGAAGCTATCCATATGAT
GGTGGTACACGAATCGATTAGCTCTTGTGGTGTTTCCATTTCAGGCCACCATGGTTCATTTTTCTTGTCACCATGTCCCACTTCTCGGAGTTCCTTCCAC
CAGGCTTGGAGTTCATTGTCTTTCAGAATCTCTTCGTCCGATCCATAGTAGAAGCTGCAGTAGTCTGTCACCCAACTTTTGATTGCAGACCATATTTCTA
AGCCATCAACAGCGTATGGATAGTCCTCTATCAGTAAACGAACACCATGAGGAGAACTCGAGTCCTCAACTGCTACTCCCCTGAAATTGAATTGGTCATA
TAAGCAAGATACCAATGTGAACATCCTAATGTTTTTGTATAATGTTAGTTTTGATGGAGCTTATTGTATAGTACCTCTTAACAAGATCAGCCGGAAGGGC
TTGATCAGGGAAAACCCAATCTTTGTAAACGACAGCTGACATTTCCATGGCAAATTTGGATGGAAAAACTGTACTCTCAAGAACTCCACCAGCATTGATT
AGGATCTGTCTTGCCATAGCATTAATATTCATTGTGTCCCGGAAATGAGGATATAGAAGCTTATGAATAGGGTGAAGCACACTTAGTTGCCTGTTTGTTG
CAATCACAAATGGCTCAATCACCGCATGTGTATTCAAC