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Detailed information on CNT30599437


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550000Fraxinus excelsiorIpomoea triloba31.9755.2980.85141forward
CNT3071772Fraxinus excelsiorQuercus suber46.9411.5682.61207forward
CNT30382166Fraxinus excelsiorManihot esculenta22.2212.8184.6998forward
CNT30563175Fraxinus excelsiorActinidia chinensis36.739.3880.86162forward
CNT30572846Fraxinus excelsiorVitis vinifera40.8219.1980180forward

Expression of CNT30599437

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MRSLRPWRWLGSITATPLNSKVVEDPREVPAL*

>peptide 2 (32 aa)
MAYLAGKTVLSSIPPALMSVCRAKAFMFIVSR*

Sequence

>CNT30599437
CATGATTGAAGTTCCTTATCATCTTGGATCATGTCATCTTTGTCGTAATAGATAGAGCAGTAGTCATCGACCCAATCTTTAATTGCCGACCAAATTTCCA
GCCCATCAACAGCAAAAGGATAATCCTCTATGAGAAGTCTTAGACCATGGCGCTGGCTCGGATCTATAACTGCCACTCCTCTGAATAGTAAAGTGGTTGA
AGATCCTCGGGAAGTGCCTGCTCTGTAAAGTTCCAGTTCTTATAAATAAAGGCTGACATTTCCATGGCATATCTTGCTGGAAAGACTGTTCTTTCAAGTA
TTCCGCCTGCATTGATGAGTGTCTGCCGAGCTAAGGCATTTATGTTCATTGTATCACGGTAATGGGGTTGCAGTAGCTTGTATATTGGGTGAAGCACACT
CAATCTTCTGTTTGTTGCAATCACAAATGGCTCTATTACTG