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Detailed information on CNT30568460


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SJY5|PUMP5_ARATH, E-value = 6e-98

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695440Actinidia chinensisOryza sativa25.3517.3880.56216forward
CNT30616300Actinidia chinensisSesamum indicum57.6333.9683.71491forward
CNT30728471Actinidia chinensisCorchorus capsularis29.3416.5382.4250forward
CNT30157858Actinidia chinensisPistacia vera22.5415.4685.94192forward
CNT3097992Actinidia chinensisSolanum tuberosum13.525.6182.61115forward
CNT30654380Actinidia chinensisRosa chinensis31.122.0879.62265forward
CNT3050712Actinidia chinensisCucumis sativus10.454386.5289forward

Expression of CNT30568460

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MATSAGLPTAAPMPPARRPAPILRRRGMLPVFGSLHFFFMMS*

>peptide 2 (30 aa)
MFITLVLITSTGGEARRHVGPEPILHHTLL*

Sequence

>CNT30568460
CCTTTTTTAAATAAAAATTACAAGCAAACATTAAATTATAAAGACTACTAATAAATAATTATAGTATTTCCTAAAATTCTTCGTCATCATCACGTCACAT
GATTTAGAAATCCTTGAGCAGCTTGCGGACCTGTTCCAGCGTCACAAAGAGCACAACAGTGAATGGTCCCTGCCTCGAGATCGTAGGGATGAAACCCTTG
TACAGTGCCATTGGGCCCTCAGATCGAACGGTCTTCATCGCACAATCAATGGCTCCGGCGTAAGGTGGGGCCATCCCCGGTTCCACCTTCATGTTCATCA
CTCTCGTTTTGATCACGTCAACCGGCGGCGAAGCTCGACGTCACGTGGGTCCCGAGCCCATCCTTCATCACACCCTTCTCTAATATTGTTTCTTTTATCT
GATCATAAGATGCGAGCTGTGATGCTGTTACAAGCATCGCGCGGTTCACCGTAAGCGATGATCCGCGCCACAGACTAGTAATTCCCTCGCTTTTTGACAT
TTGTGAAATGGCGTCGATCACGCTCTTGTAGTTGCGGCGCTGGGCCGGAGGGAGGCGGCCGTCGGCTTGCATTCGGACCATGGCGACGTCGGCGGGGTTG
CCGACGGCGGCGCCGATGCCTCCGGCGAGGAGGCCAGCGCCTATCTTGCGCAGGAGGGGCATGTTGCCGGTGTTCGGATCGCTCCATTTCTTCTTCATGA
TGTCGTAGAGGCCCATGCGGGTGGTGGAATAAAGGGTCTGGCGGAGTACTGTGGCGGAGACACCGGAGAACAGAGCGGCGGCGCCGTCGTGCTGCACGAT
CCGGATCCCAACCGCGATTGGCCCCACGCGCGGCGGCGCGTGGATCGTCCCC