Detailed information on CNT30554593


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 4e-21

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30379142Oryza glaberrimaManihot esculenta51.2517.5682.32164forward
CNT30710529Oryza glaberrimaGlycine max44.062586.52141forward
CNT3042412Oryza glaberrimaPrunus dulcis48.4420.9285.16155forward
CNT30648676Oryza glaberrimaRosa chinensis33.4414.3685.98107forward
CNT30574226Oryza glaberrimaVitis vinifera4025.6586.72128forward
CNT30577348Oryza glaberrimaOryza barthii80.31100100257forward

Expression of CNT30554593

Peptides detected in this lncRNA

>peptide 1 (56 aa)
CNLVKSDYKGSALGCLESTRGKDCTWPKKDCSLVKLDCNLVKLGCSLEMSGCNLEM*

Sequence

>CNT30554593
CTGTAATTTGGTGAAGTCTGACTATAAGGGCTCAGCCTTGGGCTGCTTGGAGAGTACGCGTGGGAAGGACTGTACTTGGCCGAAGAAGGATTGTAGCTTG
GTGAAGTTGGACTGTAATTTGGTGAAGTTGGGCTGTAGCTTGGAGATGTCGGGCTGTAACTTGGAGATGTAGGGCTATAGCTAGGTGATGTAGGGCTGTA
GCTTGGAGATGTTGGCGAGTATGATGGACTGGTAGGCGAGTATGACGGACTGGTAGGTGAGTATGATGGACTTGTTGGCGAGTAAGTAGGAGAGCCAGGT
GTATATGATGGAGAAGTGGG