Detailed information on CNT30554388


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT004664, E-value = 5e-95

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691216Oryza glaberrimaOryza sativa79.499.0885.51283forward
CNT30678071Oryza glaberrimaSetaria viridis55.3416.7780.2197reverse complement
CNT3068416Oryza glaberrimaLeersia perrieri41.579.0685.14148reverse complement
CNT30371309Oryza glaberrimaOryza glumipatula84.2731.9594300forward
CNT30110945Oryza glaberrimaOryza longistaminata73.0327.3783.08260forward
CNT30604243Oryza glaberrimaOryza punctata38.225.4792.65136forward
CNT30551838Oryza glaberrimaOryza brachyantha53.096.0680.42189forward

Expression of CNT30554388

Sequence

>CNT30554388
CTATGGGGGTGTTTAGATGGGGCTAAAACTTTTTAGCCCATGTCACATCGGATGTTTGGACGCTAATTTAGAGTATTAAACATGGACTAATAAAAAAACT
AATTTCATAAATGAGAGCTAATCCGCGAGACGGATTTTTTAAGCCTAATTAATCCATAATTATCAAAAGTTTACTGTAGCATCACATTGTCAAAATCATG
GCGTAATTAGACTCAAAAGATTCATCTCGCGAGTTAGTCCAAGCTTATAGAATGGGTTTTGTAATTAGTGTATGTTTAATACTCTAAATTAGTGTCCAAA
CATCCGATGTGACAGGGACTTAGAATAAGTCTCTGGAAACCAAACAGCCCCTATAT