Detailed information on CNT30498486


BLAST search results

BLAST vs Swiss-Prot:
sp|O64477|Y2913_ARATH, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672297Digitaria exilisSetaria viridis2.9837.7787.588forward
CNT30554278Digitaria exilisOryza glaberrima9.6760.8585.66286forward
CNT30439328Digitaria exilisAegilops tauschii4.9430.6185.62146reverse complement
CNT30243079Digitaria exilisAvena sativa19.5892.280.66579forward
CNT30450467Digitaria exilisSaccharum spontaneum86.4489.3487.052556forward
CNT3012901Digitaria exilisZea mays5.4456.2991.93161forward
CNT30350637Digitaria exilisEragrostis tef12.9277.9688.22382forward
CNT30106963Digitaria exilisOryza longistaminata3.3844.0588100forward
CNT30581183Digitaria exilisEchinochloa crusgalli92.5391.2688.232736forward
CNT30556583Digitaria exilisPanicum hallii14.7141.4784.6435forward

Expression of CNT30498486

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MESFHWMKYCVVPLGSNSSENKPGDGLALFFHGTSRWLTLVVLFSPSLPPGSHVFVGWSMLRQ*

>peptide 2 (64 aa)
MVGELDPMLTLVDHSCRFLDCSRSTRLPSLAMVKAAVVGSVTGTLELAVHTVVCSGMLVYHMAM*

>peptide 3 (74 aa)
MHYKSNCSDKPTDSLESSQPRKSGHCQVTSHLPWYRTYQAWLVQSSNSSGTAVVLFFYTHHCNPGGPNRSEHSE*

>peptide 4 (45 aa)
MVLTAAAQSSIWLRRSRKKGAMDGSSEEQRSQGWEVGNLDVWSNW*

>peptide 5 (53 aa)
VTFCSKPIVLKHNTIEKLSICRASLTHNTLEAFAPNKLQILRFMNFRNVIHRK*

>peptide 6 (56 aa)
MAVESGSFPLNTEPKAPPPSLSEKLLVTCCRSLYLKAISVPPAVLDTRRVLSRRRF*

>peptide 7 (30 aa)
MLQITVPKGNQCTSSSLGYPKSPLTAAFLK*

>peptide 8 (29 aa)
MITALLFLESGSSEAASLRKSVPPPFPLY*

>peptide 9 (41 aa)
MVVIPPGNSCKSREPFGMNSYTISLRDPSEQNPSNRTKLTC*

>peptide 10 (39 aa)
MPDKATTTVVSVCITRAIVQTSRLTVLRARSHGSLGIVR*

Sequence

>CNT30498486
GTCACATTCTGCAGTAAACCTATAGTACTGAAGCATAACACAATAGAAAAGCTGAGCATATGTAGAGCTTCGCTCACTCATAATACTCTTGAAGCATTTG
CCCCTAACAAATTGCAGATTTTACGATTTATGAACTTTCGAAATGTGATCCACCGGAAGTAGCACTTTGTGTCTGGGAAGTTGTTGTGCTATTCTGTGTC
TGTGTCTGTGTCTGAGACGTCTGACTTGAAGATATATCTGAAAAGAAGTTTATAACATCAGGGCTTTCACCAAGAACTCTCAATGACCTTGGAACAGGGG
GCATGTTTACGTCAAGGAATCCCTCGAGGATTTGAACAATCTGACCAGTTGTGGGTCTAGCACTTTCATCATCTTGGATACACCAACAGGCAACCTTACA
GGCCCTTGTGAGTTCATCAACATTTGCATCTCCTTTTAGCCTGGGATCCAACAAGGTCTGGACATTCCCTTCATGAAGCATGCTTGCTGCAAAGGTTGGG
AAGAAGGTGGATCCATTCTCTCCGTGATCAGAATTTCTCCTGCCTGATATGAGTTCTAAGAGCATCATACCATAGCTGAAGACATCTGCCTTTGCTGTTA
TTGCCACACCACTGATCCATTCAGGTGCGAGATAACCCCTTGTTCCTCTCATTGTTGTCAATACACGACTGAAGTCTCTGCCTAAGAGCTTCGCTAGACC
AAAATCAGCAACTTTAGGCACAAATGACTCATCCAAGAGTATGTTTTCTGGCTTGACATCACAATGTATAATGCAATCTCTACATTTTTCATGCAGGTAA
TTTAAGCCTCTTGCTGTTCCAAGTGCTACTTGGTATCTGGTAGCCCAGCTCATGGTCGTTATTCCACCAGGGAATAGCTGCAAGTCCAGGGAACCCTTTG
GCATGAACTCATACACAATCAGCCTCCGTGATCCCTCAGAGCAAAATCCAAGTAATCGGACCAAATTGACATGCTGAATTGTCCCAATGGTGCTCACCTC
AGCACGGAACTGCTTCTCCCCTTGGTGAAATCCGTCTAGTCGCTTCACAGCAATGGCAGTTGAATCTGGGAGCTTCCCTTTGAACACTGAGCCAAAGGCA
CCTCCACCAAGCCTCTCCGAGAAGTTGTTAGTGACATGTTGCAGATCACTGTACCTAAAGGCAATCAGTGTACCTCCAGCAGTCTTGGATACCCGAAGAG
TCCTCTCACGGCGGCGTTTCTGAAATAAGAAGTATGACACAATAGCAATCACTATTAAAACTGCAACAACTCCACCAATAATTGCACCAATGATCACTGC
CTTGCTCTTTTTGGAGTCTGGCAGCTCAGAAGCTGCAAGCCTGAGGAAGAGTGTGCCTCCTCCATTTCCACTGTATTGATCTTGAAGATTAATCAAGTCC
CCATGCCAGACAAAGCAACCACTACTGTTGTAAGCGTATGCATTACAAGAGCAATTGTTCAGACAAGCCGACTGACAGTCTTGAGAGCTCGCAGCCACGG
AAGTCTGGGCATTGTCAGGTAACCTCACACTTGCCATGGTATAGAACTTATCAGGCTTGGCTTGTGCAGAGTTCGAACTCGTCTGGCACTGCAGTGGTAC
TCTTCTTTTACACCCACCACTGTAATCCTGGAGGTCCCAATCGCTCTGAACATTCTGAGTGAATCCCTTGATGCAGGTGCAGAACGGCAGAGCATTGAGG
TTGCAGCTGCCATACGCTCCACAGAGCGCGTAGACCTCACACTGTGTTCGTGGTTGCGACCAGAACAAGATCCACTGCTGCGTGGCGTCCACCCATGTCA
GCTGCTTGATCTGCCCATTCACATCAATGATGAACCGCGAAATGATCGAGTTGTCCTTCATTGAATAGATGAAGTAGCTCTCTGTGGCGTTGTTGATGAA
CTGGAAGTTGTAGTTGTAACCGTCTGTCATCTCTGGCACAAGGCTGAAAATATTACCATTCCATGGGCCACTGGTCCAGTAAGATATGGAATCCTTCCAC
TGGATGAAGTACTGTGTCGTGCCGTTGGGGTCCAACTCCAGCGAAAACAAGCCGGGGGACGGGTTGGCGTTGTTCTTCCATGGAACGAGCCGCTGGCTGA
CCCTTGTGGTCTTGTTCAGCCCAAGCTTGCCCCCTGGAAGCCATGTGTTTGTGGGATGGTCTATGCTTCGCCAGTAAACTATTGATGTGTTGTTAGCATC
AGTGAGGTCGAGGCTACCGTCGTCTTGGAGGGTGGCGATGGTGGGGGAGCTGGATCCGATGCTCACGTTGGTCGACCACAGCTGCCGGTTCTTGGATTGT
TCGAGGAGTACAAGGTTGCCATCGCTTGCAATGGTCAAGGCTGCGGTGGTCGGGTCCGTCACTGGCACGTTGGAGTTGGCCGTCCACACTGTCGTCTGCA
GCGGTATGTTGGTGTACCATATGGCGATGTAGTAGTTGCTAGTGCTGGAGGAGGTGGTGGTGTTACCTTGGGGCGGGGTGTAGAAGCCCAAGGTGAAGTT
GTTGCCCTTGGAGACAATCTTCTGCGCCCCAGACAGCGGCGTGGAGGAGCTGATGGTGTTGACGGCGGCGGCGCAGAGTAGCATCTGGCTGAGAAGGAGT
AGGAAGAAAGGAGCCATGGACGGGAGCTCGGAGGAGCAGAGGAGCCAGGGCTGGGAGGTGGGGAATTTGGACGTTTGGAGTAATTGGTAGCGGTGGTGGG
TTGGTTGGGTACAGATGTTTTGATGGACAACAATGCTCCACTTCAGGCCTTTATGGACTAAGTACAAAAGATGGCGTCTTTGACTTGGTGCAGTAGTAGC
TAATGGTCTTTTGACAGGTACACACCCAACGCCCTTCTGGTGTGGACTGAATTATAGAGCGATTAACATAATTGCAGTCCTATGCTGAAAATGATTCCAC
GAGAATAAATGTAAGGTATTTTGTTAATGAATTCAAGGAGAGAAAGGTGCTTCCATA