Detailed information on CNT30554278


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30243079Oryza glaberrimaAvena sativa44.6833.4480210forward
CNT30498486Oryza glaberrimaDigitaria exilis60.859.6785.66286forward

Expression of CNT30554278

Peptides detected in this lncRNA

>peptide 1 (35 aa)
AATTIVSVSITGAIIQASNLTGLRTSGHCTLSIIR*

>peptide 2 (31 aa)
MHRRARTPHTVSVAGTRTRSNSPRLVPMSTA*

Sequence

>CNT30554278
GCAGCCACTACTATTGTAAGTGTAAGCATTACAGGCGCAATTATTCAGGCAAGCAACCTGACAGGCCTGAGAACTAGCGGCCACTGCACTCTGAGCATTA
TCAGGTAGCCTCACACTAACCATGGAATAGAACTTATCAGGCTGAGTCTGTGCAGAGCTTGAGTTGGTTTGGCACTGCAAAGTTGCAGAACGGCAGGACA
TTGAGGTTGCAACTTCCATATGCACCGCAGAGCCCGTACACCTCACACTGTGTCCGTGGCTGGGACCAGAACAAGATCCAATTCTCCGAGGCTGGTACCC
ATGTCCACTGCTTGATCTGCCCATTCACATCAATGGTGAACCGCGAGATGATCGAGTCATCCTTCATGGAGTATATGAAGTAGCTCTCCGAGACATTGTT
AATGAACCGGAAGTTGTAGTTGTAACCGGCCGTCATCTCGGGCACAAGACTGAAGATATTACCGTTCCAA