Detailed information on CNT30581183


BLAST search results

BLAST vs Swiss-Prot:
sp|O64477|Y2913_ARATH, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672297Echinochloa crusgalliSetaria viridis4.659.2388.41138forward
CNT30243079Echinochloa crusgalliAvena sativa17.2882.4883.01518forward
CNT3012901Echinochloa crusgalliZea mays5.9762.5994.41179forward
CNT30498486Echinochloa crusgalliDigitaria exilis91.2692.5388.232736forward
CNT30556583Echinochloa crusgalliPanicum hallii15.744588.35472forward

Expression of CNT30581183

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MHQQATLQALVSSSTFASMFSLGSNKVCTSPS*

>peptide 2 (30 aa)
MASLTCYSSYGLLTGTRPTPFWCGMIAVLC*

>peptide 3 (39 aa)
MPNKAAAAVVSVSITRAVAQTSHLTVLRARSHGSLSIIR*

>peptide 4 (30 aa)
MLQIAVPKGDQCAPSSLGYPKSPFSAVFLK*

>peptide 5 (55 aa)
LSPPPPRSPAGRAGWRLPSKHSGAGAQAGAPASPRLLPLRRVAATESPVHRLSDL*

>peptide 6 (65 aa)
MQLQNGRALRLQLPYAPQSPYTSHCIRGCDQNKIHCCALSNHVSCLICPSTSMMNLEMTLLSFIE*

>peptide 7 (51 aa)
MKYCVVPLGSSSSENGPGEGLALFLHGTSRWLTPVVLFSPSLPPGSHVFVG*

>peptide 8 (52 aa)
MARERGWRYSSMEQAAGSHQWSCSAQACPPEAMCLWGDLCFANTQLMNWRHQ*

>peptide 9 (77 aa)
SRRLRRAAPPAVPVGGCLASTAEPARRQEHPPRLACSLSVASLRPNPQFTGYLIYELWECEPPEVALCVWEVVLFCV*

>peptide 10 (88 aa)
MLRQYTVDELAASMRSRLPISWRTAMVELDPTLTLVDHNCRFLDWSRRTRFPSLPMVRAAVVGSVTGVSELAVHTVVCCGMLLYHMAM*

>peptide 11 (41 aa)
MNSYTSSLRDPSEQNPSRRTKLTCWIVPMVLTSARNCFSPW*

>peptide 12 (43 aa)
MVSTAAQSRIWLSGMRRKKKKGAMDGSSEEQPGLGGGEFGLLE*

Sequence

>CNT30581183
CCTCTCGCCGCCTCCGCCGCGCAGCCCCGCCGGCCGTGCCGGTTGGCGGTTGCCTAGCAAGCACAGCGGAGCCGGCGCGCAGGCAGGAGCACCCGCCTCG
CCTCGCCTGCTCCCTCTCCGTCGCGTCGCTGCGACCGAATCCCCAGTTCACAGGTTATCTGATTTATGAACTTTGGGAATGTGAACCACCTGAAGTAGCA
CTGTGTGTCTGGGAAGTTGTGCTATTCTGTGTCTGAGAAGTCTGACTTGAAGATATATCTGAAAAGAAGTTTATAGCATCAGGGCTTTCACCAAGAACTC
TTAATGACCTTGGAACAGGGGGCATGTTAACATCAAGGAATCCCTCGAGGATTTGAACAATCTGACCAGTTGTGGGTCTAGCACTTTCGTCATCTTGGAT
GCACCAACAGGCAACCTTACAAGCTCTTGTGAGTTCATCAACATTTGCATCTATGTTTAGCCTGGGGTCCAACAAGGTCTGCACATCTCCTTCATGAAGC
TTGCTTGCAGCAAAGGTTGGGAAAAAGGTGGCTCCATGCTCTTCTCCGTGATCGGAATTTCTCCTTCCTGATATGAGTTCGAAGAGCATCATGCCATAGC
TAAAGACATCTGCCTTTGCTGTTATTGCCACACCACTGATCCACTCAGGTGCCAGGTAACCCCTTGTTCCTCTCATTGTTGTTAATACACGACTGAAGTC
TCTGCCTAAGAGCTTTGCTAGACCAAAATCAGCCACTTTAGGCACAAATGACTCATCCAAGAGTATGTTTTCTGGCTTGACATCACAGTGTATAATGCAA
TCCCTACATTTTTCATGCAGGTAATTTAAGCCTCTTGCTGTTCCAAGTGCTATTTGGTACCTGGTGGCCCAGCTCAGTGCTGGCTTTCCAGCGAATAGCT
GCAAGTCCAGAGAACCCTTTGGCATGAACTCATACACAAGCAGCCTCCGTGATCCTTCAGAACAAAATCCAAGTAGGCGGACCAAATTGACATGCTGGAT
CGTTCCAATGGTGCTCACCTCAGCACGGAATTGCTTCTCCCCTTGGTGAACTCCATCTAGCCTCTTCACAGCAATAGCAGTTGAATCTGGGAGCTTCCCT
TTGAACACTGAGCCAAAGGCGCCTCCACCTAGCCTATCTGAGAAGTTATTAGTGACATGCTGCAGATCGCTGTACCTAAAGGCGATCAGTGTGCCCCCAG
CAGTCTTGGATACCCGAAGAGTCCTTTCTCGGCGGTATTTCTGAAATAGGTAGTATGACACAATAGCAAGGACTATTAAAACTGCGGCAACTCCACCAAC
AACTGCAGCAACGATCACTGTCTTGCCCTTTTTGGAGTCTGGCAACTCAGAAGCTGCAAGCCTGAGGAAGAGTGTACCTTCTCCGTTTCCACTGTATTGT
TCTTGGAGGTTAATCAGGTCCCCATGCCAAACAAAGCAGCCGCTGCTGTTGTAAGTGTAAGCATTACAAGAGCAGTCGCTCAGACAAGCCACCTGACAGT
CTTGAGAGCTCGCAGCCACGGCAGTCTGAGCATTATCAGGTAGCCTCACACTTGCCATGGTATAGAACTTATCAGGCTTGGCTTGTGCAGAGCTCGAATT
TGTCTGACACTGCAGTGGTACTCTCCTTTTACACCCACCACTGAAATCCTGGAGGTCCCAATCGCTCTGAACCTTCTGAGTGAACCCCTTGATGCAGTTG
CAGAACGGCAGGGCATTGAGGTTGCAGCTGCCATACGCCCCACAGAGTCCATACACCTCACACTGCATCCGTGGTTGCGACCAGAACAAGATCCACTGCT
GCGCGTTGTCCAACCATGTCAGCTGCTTGATCTGCCCATCTACGTCAATGATGAATCTTGAGATGACGTTGTTGTCCTTCATCGAGTAGATGAAGTAGCT
CTCAGTGGCATTGTTGATGAACTGGAAGTCATAGTTGTAACCAGATGTCATCTCCGGCACAAGGCTAAAAATATTTCCATTCCAAGGACCGCTGGTCCAG
TATGTTATGGAATCATTCCACTGAATGAAGTATTGTGTTGTGCCTCTCGGATCCAGCTCCAGTGAGAATGGCCCGGGAGAGGGGTTGGCGTTATTCCTCC
ATGGAACAAGCCGCTGGCTCACACCAGTGGTCTTGTTCAGCCCAAGCTTGCCCCCCGGAAGCCATGTGTTTGTGGGGTGATCTATGCTTCGCCAATACAC
AGTTGATGAATTGGCGGCATCAATGAGATCAAGGCTACCAATATCCTGGAGGACGGCGATGGTGGAGTTGGATCCGACGCTCACGTTGGTCGACCACAAC
TGCCGGTTCTTGGATTGGTCAAGGAGAACAAGGTTTCCATCGCTGCCGATGGTCAGGGCAGCGGTGGTCGGGTCTGTCACCGGCGTGTCGGAGTTGGCCG
TCCACACAGTCGTCTGCTGCGGTATGTTGCTGTACCATATGGCGATGTAGTAGTTGCTAGAGCTGGAGGTGGTGGTGTTACCTTGGGGCGGGTTGTAGAA
GCCCAAAGTGAAGTTGTTGCTCTTGGACACAATCTTCTGCGCCCCGGACAGCGGTGTGGAGGAGTTGATGGTGTCGACGGCTGCGCAGAGTAGGATCTGG
CTGAGTGGCATGAGGAGGAAGAAAAAGAAAGGAGCCATGGATGGGAGCTCGGAGGAGCAGCCAGGGCTGGGGGGTGGGGAGTTTGGACTTCTGGAGTAAT
TAGAGGTGGTGGTAGTTGGGTACAGATGTCTTGATGGAGAGCAGTGCTCCACTTCATGGACTTGAGTACAAAAGATGGCGTCTTTGACCTGTTATAGCAG
CTATGGTCTTTTGACAGGTACACGCCCAACGCCCTTCTGGTGTGGAATGATTGCAGTCCTGTGCTGAAAATGATCACACATGAATAGACGAAAGGTATTT
TGCTAATGAATTCAAGGAAGAAAGGTGCTTGCGATTTCTTTTACTTATGAAAACAGTGCTGGTCATTTTAATTGATTTTTGCAACCAATTAAACTGGG