Detailed information on CNT30440257


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 1e-132

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30186758Aegilops tauschiiSecale cereale99.2193.8396.15624forward
CNT30300930Aegilops tauschiiTriticum aestivum10062.7196.03629forward
CNT30224420Aegilops tauschiiHordeum vulgare93.867.0590.34590forward
CNT30393482Aegilops tauschiiTriticum turgidum101.1149.5795.75636forward
CNT30665014Aegilops tauschiiTriticum dicoccoides96.0391.195.86604forward
CNT30149365Aegilops tauschiiBrachypodium distachyon77.2776.7886.21486forward

Expression of CNT30440257

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MVTRASPKRDDDGKFLTALPAKAGEESDMVVAAILIDGGPLYSVLQE*

>peptide 2 (29 aa)
MAQRQWITSSSRFLAKVSGSADSPAVSHP*

>peptide 3 (73 aa)
RVEWVDDFTEWSTGNAVALDGAHEHNLTSPDGKDTLCVHKAWVAEVVEAALAEDLGSSLEPNSLTKLNAIAGE*

Sequence

>CNT30440257
CCGGGTAGAGTGGGTCGATGATTTCACCGAGTGGTCCACCGGCAATGCGGTAGCCCTCGACGGCGCCCATGAGCACAACCTGACAAGCCCAGATGGCAAG
GATACTTTGTGCGTGCACAAGGCTTGGGTTGCCGAGGTAGTCGAGGCCGCCCTCGCTGAAGATCTGGGATCCAGCCTTGAACCAAACAGCCTCACCAAAC
TTAACGCCATTGCGGGCGAGTAGCTCGGGGAAGACGCAACCGAGCGCGCCAAGCATGGCCCAACGGCAGTGGATCACCTCGAGTTCCCGGTTCTTGGCGA
AGGTCTCGGGGTCAGCCGACAGCCCAGCGGTGTCCCACCCGTAGTCGCCGGGGAACTCACCGGTCAGGTAGCTCGGGGGCTCACCAGAAAGTGGGCCGAG
GTAGAGCACGCGGTCAGAGCCATACCACGGGCTGCCGGAGACAACCTGCTTGGCCTTTGCCGCCGTCTTGCGCATGGTGACGCGGGCGTCCCCGAAAAGA
GACGATGATGGCAAGTTCTTGACTGCCTTGCCGGCAAAGGCTGGAGAAGAGAGTGACATGGTGGTTGCGGCCATTCTGATCGATGGAGGTCCTCTGTATT
CTGTTCTCCAAGAATGAGGAGTGGGTGTG