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Detailed information on CNT30393482


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 2e-142

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30186758Triticum turgidumSecale cereale51.6899.794.12663forward
CNT30440257Triticum turgidumAegilops tauschii49.57101.1195.75636forward
CNT30665014Triticum turgidumTriticum dicoccoides50.7498.1998.62651forward

Expression of CNT30393482

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MQPSAPSMAQRQWITSSSRFLAKVSGSADRPAVSHP*

>peptide 2 (34 aa)
MVVQLRPHNSMLHREHTHLTCQERSWWQMPRHCC*

>peptide 3 (59 aa)
MVTRASPKREDDGKFFTALPAKAGEESDMVVAAILIDGGPTYSVFCSPRMRSGCGDGLR*

>peptide 4 (31 aa)
MQPCKFAFVHDALVDIAQSTRQMGETEGGKT*

Sequence

>CNT30393482
GACCCCTTGCTATTTTTCCACATTGCTAGATCAATACATGTCCTTGAATTTTTTCAAACCATTTAAATAAAATTACAGAGAGAGCTTAAACAGACTGATG
CACTCCCTGTGAAGCATGCATAACTCAAACTTCTATCTTGCTTTTAGGCCAGTAACCACTCATTATTTTTGTTGCCCAGTATTTTGACCGAAGGCCAGAA
CAAGGCCTCAACCATGTACAACTCTCTTCTCGATGCAGCCCTGCAAATTTGCCTTTGTACATGATGCATTAGTTGACATTGCCCAGAGCACACGTCAAAT
GGGTGAGACTGAAGGTGGGAAAACATAAGCTCTTGCAGAGAATCTCCTCTTAACGTTCTTAGACAATCGAATCCTCGTAATTTACATCATGGTAGTACAA
CTCAGACCACACAACAGCATGCTTCACCGGGAGCACACACACCTTACTTGCCAGGAACGAAGTTGGTGGCAAATGCCCAGGCATTGTTGTTGACGGGGTC
GGCAAGGCCAAGCGGATCAAAACTGCCGCCCGGGTAGAGTGGGTCGACGATCTCACCGAGTGGTCCACCGGCAACGCGGTAGCCCTCGACGGCGCCCATG
AGCACGACCTGGCAAGCCCAAATGGCAAGGATACTTTGCGCGTGCACAAGGCTTGGGTTGCCGAGGTAGTCAAGGCCGCCCTCGCTGAAGATCTGGGATC
CGGCCTTGAACCAAACAGCCTCACCAAACTTAACGCCGTTGCGGGCGAGTAGCTCGGGGAAGATGCAACCGAGCGCGCCAAGCATGGCCCAACGGCAGTG
GATCACCTCGAGTTCCCGGTTCTTGGCGAAGGTCTCGGGGTCAGCCGACAGACCAGCGGTGTCCCACCCGTAGTCGCCGGGGAACTCACCGGTCAGGTAG
CTCGGGGGCTCACCAGAAAGCGGGCCCAGGTAGAGCACGCGGTCAGAGCCATACCACGGGCTGCCAGAGGCAACCTGCTTGGCCTTTGCCGCTGTCTTGC
GCATGGTGACGCGGGCATCCCCGAAAAGAGAAGATGATGGCAAGTTCTTCACTGCCTTGCCGGCAAAGGCTGGAGAAGAGAGTGACATGGTGGTTGCGGC
CATTCTGATCGATGGAGGTCCTACGTATTCTGTATTCTGTTCTCCAAGAATGAGGAGTGGGTGTGGAGATGGCTTGAGATGATCGGAGCCGGGGGCCTCT
TAAGGCAGTGGAAGGACAGAAGGAATTGAACAGAGAGAGGTGCGGAGCAGGAAATCTGTATCTTGGATGGCATTGGTGCAGAG