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Detailed information on CNT30665014


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 1e-142

BLAST vs NONCODE:
NONSTUT001352, E-value = 1e-26

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30186758Triticum dicoccoidesSecale cereale95.6395.3494.64634forward
CNT30393482Triticum dicoccoidesTriticum turgidum98.1950.7498.62651forward
CNT30440257Triticum dicoccoidesAegilops tauschii91.196.0395.86604forward

Expression of CNT30665014

Peptides detected in this lncRNA

>peptide 1 (88 aa)
CLRVVGKAKRIKTAARVEWVDDLTEWSTGNAVALDGAHEHDLASPNGKDTLRVHKAWVAEVVKAALAEDLGSGLEPNSLTKLNAVAGE*

>peptide 2 (37 aa)
PQGRRQGQADQNCRPGRVGRRSHRVVHRQRGSPRRRP*

>peptide 3 (36 aa)
MQPRAPSMAQRQWITSSSRFLAKVSGSADSPAVSQP*

>peptide 4 (47 aa)
MVTRASPKREDDGKFFTALPAKAGEESDMVVAAILIDGGPTYSVFCSP

Sequence

>CNT30665014
TGCCTCAGGGTCGTCGGCAAGGCCAAGCGGATCAAAACTGCCGCCCGGGTAGAGTGGGTCGACGATCTCACCGAGTGGTCCACCGGCAACGCGGTAGCCC
TCGACGGCGCCCATGAGCACGACCTGGCAAGCCCAAATGGCAAGGATACTTTGCGCGTGCACAAGGCTTGGGTTGCCGAGGTAGTCAAGGCCGCCCTCGC
TGAAGATCTGGGATCCGGCCTTGAACCAAACAGCCTCACCAAACTTAACGCCGTTGCGGGCGAGTAGCTCGGGGAAGATGCAACCGAGAGCGCCAAGCAT
GGCCCAACGGCAGTGGATCACCTCGAGTTCCCGGTTCTTGGCGAAGGTCTCGGGGTCGGCCGACAGCCCAGCGGTGTCCCAGCCGTAGTCGCCAGGGAAC
TCACCAGTGAGGTAGCTCGGGGGCTCACCAGAAAGTGGGCCGAGGTAGAGCACGCGGTCAGAGCCATACCACGGGCTGCCAGAGGCAACCTGCTTGGCCT
TTGCCGCTGTCTTGCGCATGGTGACGCGGGCATCCCCGAAAAGAGAAGATGATGGCAAGTTCTTCACTGCCTTGCCGGCAAAGGCTGGAGAAGAGAGTGA
CATGGTGGTTGCGGCCATTCTGATCGATGGAGGTCCTACGTATTCTGTATTCTGTTCTCCAAG