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Detailed information on CNT30409807


BLAST search results

BLAST vs Swiss-Prot:
sp|P12062|CB26_PETSP, E-value = 1e-125

BLAST vs NONCODE:
NONSTUT002514, E-value = 1e-60

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30172025Papaver somniferumTrifolium pratense72.3246.1980.11533forward
CNT30605018Papaver somniferumGossypium raimondii63.7774.0282.34470forward
CNT30204126Papaver somniferumHelianthus annuus36.9153.1281.99272forward
CNT30360562Papaver somniferumLactuca sativa69.255.9882.16510forward
CNT30645477Papaver somniferumCannabis sativa16.8232.5587.9124forward
CNT30114814Papaver somniferumEutrema salsugineum64.5957.7779.41476forward

Expression of CNT30409807

Peptides detected in this lncRNA

>peptide 1 (48 aa)
GNMVIKVFNWTLSCNNSLNKIPKHGEHSKSSILDLLYLQFRKGLWVIS*

>peptide 2 (35 aa)
MENIASLPFLISFTFNSEKDSGSSANPRGSKDPPG*

Sequence

>CNT30409807
CGGCAACATGGTCATAAAGGTTTTCAATTGGACCCTTTCCTGTAACAATAGCCTGAACAAAATACCCAAACATGGAGAACATAGCAAGTCTTCCATTCTT
GATCTCCTTTACCTTCAATTCAGAAAAGGACTCTGGGTCATCAGCTAACCCTAGAGGGTCAAAAGATCCACCGGGGTAAAGTTTGTCTAGTCCTTCTCCA
AGTGGACCACCACCAACTCTGTATCCCTCAACAAACCCCATTAGAACAACTTGAGTAGCCCAGATTGCAAGGATGCTTTGGGCATGTACCAAGTTGCGGT
TTCCAAGGTAGTCCAAACCTCCCTCGGAGAAGATCTGTGATCCAGCTTTGAACCATACTGCCTCGCCGAAGTTGATACCGTTCTTTGAGAGAACCTCAGG
GAAGACGCATCCTAGGGCACCCAACATAGCCCACCTGCAGTGGATCACTTCGAGTTCGCGGTTCTTTGCAAATGTCTCTGGGTCAGCAGATAACCCGGCT
GTGTCCCAACCGTAGTCACCTGGGAATTCACCAGTGAGTGCGTCGCATGGAGATACGACCACCTTCGACATTGCCAACTTTGCGGATGAACTCATTTTGT
TGCTTCAAAGCAGTTTGACCAGCGAATGCAGACCTTTGAATGGCAGAGGTGGCCATGACTCTCTTTTTCTAGTGCTTCTTTGTTGTTCACCTGTTCTTTG
TTATGTTTTCTAGAGGATGAAGAAGCTGATGAAGTTA