Detailed information on CNT30381130


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9S7M0|CB3_ARATH, E-value = 2e-69

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30516186Manihot esculentaJuglans regia30.8826.9985.71105forward
CNT30630022Manihot esculentaVigna unguiculata38.8245.8387.88132forward
CNT30564423Manihot esculentaActinidia chinensis49.1226.5188.02167forward
CNT30510187Manihot esculentaSolanum lycopersicum99.4138.3283.43338forward
CNT3062296Manihot esculentaArabidopsis lyrata47.3534.6285.09161forward
CNT30645477Manihot esculentaCannabis sativa47.9442.7887.12163forward
CNT3058205Manihot esculentaAmborella trichopoda5024.8285.88170forward
CNT30726147Manihot esculentaLupinus angustifolius42.9421.2888.36146forward

Expression of CNT30381130

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MASLPFLISFTFSSANVTGSSARMLCAWTRFGFPK*

>peptide 2 (31 aa)
SIISNWVVKVVQKVLQGTLPSYNSLNKETKH*

Sequence

>CNT30381130
AAGCATTATTAGCAACTGGGTTGTCAAGGTGGTCCAAAAGGTTCTCCAGGGGACCCTTCCCAGTTACAATAGCTTGAACAAAGAAACCAAACATTGAGAA
CATGGCTAGCCTTCCATTCTTGATCTCCTTCACCTTCAGCTCTGCAAATGTAACTGGATCATCTGCAAGGATGCTTTGTGCATGGACTAGGTTTGGGTTT
CCCAAGTAGTCTAAGCCACCTTCTGAGAAGATTTGAGCTCCAGCTTTGAACCATACTGGTTCCTTGAAGTCCACCTTTACCCATTTCTCAAGTACTTCTG
GTGTGATGCAGCCTAGTGCTCCAAGCATAGCCCATCTCCC