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Detailed information on CNT30371121


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696354Oryza glumipatulaOryza sativa51.8533.899.4168forward
CNT30226328Oryza glumipatulaHordeum vulgare42.931.5283.45139forward
CNT30399969Oryza glumipatulaTriticum turgidum29.9417.1484.5497reverse complement
CNT30589867Oryza glumipatulaMusa acuminata2513.8585.1981forward
CNT30444949Oryza glumipatulaSaccharum spontaneum47.5317.9186.36154forward
CNT30352572Oryza glumipatulaEragrostis tef20.6825.5785.0767forward

Expression of CNT30371121

Peptides detected in this lncRNA

>peptide 1 (51 aa)
IKITSLHALLFTDVDPRVTNIDEMYCGSDIACSSTRLCTSEWSSTWPRRRG*

>peptide 2 (29 aa)
LRSLHYMLYCSRTSIPESQTSMKCTAAAT*

Sequence

>CNT30371121
TATTAAGATCACTTCATTACATGCTTTATTGTTCACGGACGTCGATCCCAGAGTCACAAACATCGATGAAATGTACTGCGGCAGCGACATAGCATGCAGT
TCAACACGACTGTGTACGAGTGAGTGGTCGTCTACTTGGCCGCGGCGTCGAGGGTGATGAACACGCCGCGGTTCGCCGCGCACACGACGCGGGCGCAGCC
GATGCGCACCGACTTGCGCCACACCACCTGGGTGTAGTGGCCGCACACCTTGCCTGGGTCGCACGTGTTGGTGTCGTAGTGGTAGTTCTTCTTCTCGCCC
ACCCACGACGCCACCGCGTCCGCG