Detailed information on CNT30226328


BLAST search results

BLAST vs Swiss-Prot:
sp|Q05968|PR1_HORVU, E-value = 2e-48

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690438Hordeum vulgareOryza sativa27.2133.7193.33120forward
CNT30307702Hordeum vulgareTriticum aestivum53.2935.0795.74235forward
CNT30552029Hordeum vulgareOryza glaberrima35.1526.5983.23155forward
CNT30451061Hordeum vulgareSaccharum spontaneum21.329.6288.394forward
CNT30141157Hordeum vulgareLolium perenne35.616.3488.54157forward
CNT30685221Hordeum vulgareTriticum urartu50.5725.3793.27223forward
CNT30371121Hordeum vulgareOryza glumipatula31.5242.983.45139forward

Expression of CNT30226328

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MLIIYYSPGWNTWLSTAFLLFTRSVPLAS*

Sequence

>CNT30226328
GTGTTCATCATCATTGAAGATTATGTTTTTTTCTTCTTCCGTGGCAACGCATGGGCCATTTTGCTAATAATTATATAAATGCTCATTATTTATTATAGTC
CAGGATGGAATACATGGCTTAGTACGGCATTCCTTTTATTTACTCGCTCGGTCCCTCTAGCTAGTTAGGAATTCGAAGGTGCATGAGATTAGGGACGAGA
GACGATGACGTGCATCACGGTTAGTATGGTTTCTGTCCAATGATATTCCCGCGGGGCTCGTAGTTGCAGACGACGCGAGCGCAGCCGATGCTGGTCGACG
CGCGCCACACCACCTGAGTGTAGTGCCCGCACACCTTCCCCGCCGCGCAGGTGTTGGAGCCGTAGTCGTAGTCCTTCTTCTCGCTCACCCACGAGTTCAC
CGCGTCCGATGCCTTCCAGTCCGCGCCAGCCGACCCCCAGA