Detailed information on CNT30352572


BLAST search results

BLAST vs Swiss-Prot:
sp|Q05968|PR1_HORVU, E-value = 9e-31

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT304630Eragrostis tefZea mays70.9919.8981.18186forward
CNT30371121Eragrostis tefOryza glumipatula25.5720.6885.0767forward

Expression of CNT30352572

Peptides detected in this lncRNA

>peptide 1 (86 aa)
LPDVVARRPVAADDHGVLVGAEDAAAPDAGGVLPYDGGVVAAHLALVAGVVAVVVALLLGAPVVHRRLPRQRAGAHHQVLPVRRVRV

>peptide 2 (85 aa)
SRCSCPAASSCRRSWCPCWRRGRGRTRRWWCPSIRRRCSGRTSGPGRRSCRRSGSSSSRRSSRPPSSSTTARRSPSSGSPRTASPS

Sequence

>CNT30352572
CTTCCCGATGTAGTTGCCCGGCGGCCAGTAGCTGCAGACGATCATGGTGTCCTTGTTGGCGCAGAGGACGCGGCCGCACCCGACGCTGGTGGTGTCCTTC
CATACGACGGCGGTGTAGTGGCCGCACATCTGGCCCTGGTCGCAGGAGTTGTCGCCGTAGTGGTAGCTCTTCTTCTCGGCGCTCCAGTCGTCCACCGTCG
TCTTCCACGACAGCGCGCCGGAGCCCATCATCAGGTTCTCCCCGTACGGCGAGTCCGAGTGG