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Detailed information on CNT30368719


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONBNAT007048, E-value = 3e-96

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30287202Sorghum bicolorTriticum aestivum34.3464.6789.25465forward
CNT30440878Sorghum bicolorAegilops tauschii30.853.0586.33417forward
CNT30647369Sorghum bicolorRosa chinensis20.9731.3587.68284forward
CNT30706378Sorghum bicolorPrunus avium33.4640.0988.3453forward
CNT3053016Sorghum bicolorAmborella trichopoda22.0832.4385.62299forward
CNT3024873Sorghum bicolorPopulus trichocarpa25.6361.5286.46347forward

Expression of CNT30368719

Peptides detected in this lncRNA

>peptide 1 (81 aa)
MTPTATVCLMSRTAKRPRGGYSEKVSTTMGLVGTIFTIPASPFLRNLGSFSSSLPDRLSILVTSSANLTAMCEVWQSSTGA*

Sequence

>CNT30368719
ACACTGCAACACCGGTAGTAACAAAAACTCAACCATATATGGCTAACACCCGTTGTTCGATACAAAAATAACAGAATTGAGTCTCAACAGCACCCTGGTT
TTAGCAAAAATAACAGTACTAGATGGACCAGACAAACATTGCCAGCACAGTTTAGTTGCTCAAGCGATAACAGCAACAGCAATGACGATATATTTTTGAA
GTTTCAACTAGGTATCCCACGAGCAAACAGAGGCGCATCATTTCTTCTTGGCGGCAGCCTTGGTCACCTTGGCTCCAGTTGGGTCCTTCTTCTCCACACT
CTTGATGACTCCAACAGCCACCGTTTGCCTCATGTCCCGGACAGCAAAGCGACCAAGAGGAGGATACTCAGAGAAGGTCTCCACCACCATGGGCTTGGTG
GGAACCATCTTCACCATACCAGCATCACCGTTCTTGAGGAATTTGGGCTCCTTCTCAAGCTCCTTGCCAGATCGCCTATCAATCTTGGTAACCAGCTCAG
CAAACTTGACAGCAATGTGTGAGGTGTGGCAGTCCAGCACTGGGGCGTAGCCGTTGCCGATCTGCCCAGGATGGTTTGATGATACCAGTCTCAACACGCC
CGACAGGAACAGTTCCAATACCACCAATCTTGTACACGTCCTGAAGGGGGAGACGCAGTGGCTTGTCTGAAGGCCTCTTTGGCTCATTGATCAAGTCCAG
AGCCTCAAGCAGGGTTGGGCCCTTGTACCAGTCAAGGTTGGTGGACCTCTCAATCATGTTGTCACCTTCAAAACCAGAGATGGGAACAAAGTGGATCTTG
TCTGGGTTGTATCCAACCTTCTTCAGGTAGGAAGAGACTTCCTTCACAATCTCATCATAACGGGCCTTCGAGTACTTGGGTTTGGAGGCCACATACCCAC
GCTTCAGATCCTTCACAGCAACATTCTTAACGTTGAAGCCAACATTGTCACCAGGAAGGGCCTCCTGGAGAGCCTCGTGGTGCATCTCAACAGACTTAAC
CTCAGTTGTAAGGCCACTAGGACCGAAGGTGACAACCATACCCGGCTTGATGATACCAGTCTCAACACGTCCCACAGGAACAGTTCCAATACCACCAATC
TTGTACACATCCTGAAGGGGGAGACGCAGGGGCTTGTCTGAAGGCCTCTTTGGCTCATTGATTAAGTCCAGAGCCTCAAGCAGGGGTTGGGCCCTTGTAC
CAGTCAAGGTTGGTGGACCTCTCAATCATGTTGTCACCTTCAAAACCAGAGATGGGAACAAAGTGGATCTTGTCTGGGTTGTATCCAACCTTCTTCAGGT
AAGAAGAGACTTCCTTAACAATCTCATCATAACGGGCCTTCGAGTACTTGGGTG