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Detailed information on CNT30706378

BLAST search results

BLAST vs Swiss-Prot:
sp|O64937|EF1A_ORYSJ, E-value = 3e-129

BLAST vs NONCODE:
NONMEST004097, E-value = 4e-120

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30672753	Prunus avium	Setaria viridis	51.15	65.53	82.53	578	forward
CNT30618435	Prunus avium	Sesamum indicum	29.29	67.41	86.71	331	forward
CNT3020493	Prunus avium	Citrullus lanatus	50.53	36.98	86.34	571	forward
CNT30505987	Prunus avium	Nicotiana attenuata	21.59	74.16	88.11	244	forward
CNT30588666	Prunus avium	Musa acuminata	28.94	67.28	84.1	327	forward
CNT30440878	Prunus avium	Aegilops tauschii	21.68	31.17	90.61	245	forward
CNT30232362	Prunus avium	Ananas comosus	26.02	51.49	85.37	294	forward
CNT30721805	Prunus avium	Triticum spelta	20.18	15.79	91.23	228	forward
CNT30368719	Prunus avium	Sorghum bicolor	40.09	33.46	88.3	453	forward
CNT3052982	Prunus avium	Amborella trichopoda	55.13	47.63	82.18	623	forward
CNT30147611	Prunus avium	Brachypodium distachyon	17.61	33.17	89.45	199	forward

Expression of CNT30706378

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MLYCNPSQSAQFTSSLLQIWSPWLHLDPSSPHS*

>peptide 2 (74 aa)
MSLTAKRPSGGYSEKVSTTIGLVGIILTNPASPFFKNLGSFSSSLPDRLSILVRISLNLTAMWEVWQRNHASDP*

Sequence

>CNT30706378
AAAAAAACTCTTGTAATCGGAAAAGAAATATAATGAAACCGATCAAAATTTGACGCAATTATGAGTCAATACTAATCATATTTTTTTTAAAGAAAGGCAA
CACGATCCGAACAAAGTATAGCAATAAATTCTAAACACACCACAACTGACACGAATTAAAACCACAAAACAAAACAGCCAAACGACACCAGATTATAACC
CCGCCACCGCCGATCGAGCACCCAGTTCTGCGAACAGCAGCCAAGAGACGACGGAGGAGACTTGAAATTATAACCAACAAGACAGACGACCCCTAAGCAC
CTACCAGAAAAACTAATAGCAACAACCCATGCTTTATTGTAACCCTTCTCAAAGCGCACAATTCACTTCTTCTTTGCTGCAGATTTGGTCACCTTGGCTC
CACTTGGATCCTTCTTCTCCACACTCTTGATCACTCCCACAGCAACAGTCTGTCGCATGTCCCTGACAGCGAAACGACCAAGTGGGGGATACTCGGAGAA
GGTCTCCACCACCATTGGCTTGGTAGGAATCATCTTAACAAATCCAGCATCACCATTCTTCAAAAACTTGGGCTCCTTCTCGAGCTCCTTGCCGGATCGT
CTGTCAATCTTGGTTAGAATCTCATTGAACTTGACGGCAATGTGGGAGGTGTGGCAACGAAACCACGCTTCAGATCCTTGACTGCGACGTTCTTCACGTT
GAAGCCAACATTGTCTCCTGGAAGAGCCTCCGGAAGAGCTTCGTGGTGCATCTCCACAGACTTAACTTCAGTTGTCAGTCCAGAAGGGCCAAAGGTGACA
ACCATACCAGGCTTGATGATACCAGTTTCAACACGTCCGACAGGGACAGTACCAATGCCACCAATCTTGTAGACATCCTGAAGTGGGAGGCGGAGGGGCT
TGTCTGTGGGCCTCTTGGGCTCATTGATCAAGTCAAGGGCCTCAAGAAGGGTAGGACCCTTGTACCAGTCAAGGTTGGTAGACCTCTCAATCATGTTGTC
ACCCTCAAACCCAGAGATGGGAACAAAGGGGATCTTGTCTGGGTTGTAGCCAACCTTCTTCAGATAGGATGAGACTTCCTTAATAATTTCATCGTACCTT
GCCTTCGAGTACTTTGGAGTGGTAGCATCC