Detailed information on CNT30313480


BLAST search results

BLAST vs Swiss-Prot:
sp|P10795|RBS1A_ARATH, E-value = 1e-76

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372132Camelina sativaArabidopsis thaliana42.5340.0993.82259forward
CNT30616510Camelina sativaSesamum indicum29.7213.1282.32181forward
CNT3069740Camelina sativaQuercus suber25.4517.1182.58155forward
CNT30402284Camelina sativaBeta vulgaris29.8983.1181.87182forward
CNT30508072Camelina sativaNicotiana attenuata29.2320.8282.02178forward
CNT30252137Camelina sativaAvena sativa32.8421.5585200forward
CNT3059910Camelina sativaArabidopsis lyrata35.6341.4197.7217forward
CNT30625551Camelina sativaDaucus carota29.8911.1581.87182forward
CNT30479552Camelina sativaArabidopsis halleri37.7740.0796.52230forward
CNT30335392Camelina sativaCynara cardunculus28.5721.3584.48174forward

Expression of CNT30313480

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MFKLDYLQLEFNTGNPLVADKVVNFLSQFGFGKVRKVRESLKLLLSDRRGNHCSGREHR*

Sequence

>CNT30313480
TTTTGATGTTTACAAAGAAACAAAGCAAAGGGGGGAGAGGTTTTGAAATTAAGCATTGGTGAAGCTTGGGGGCTTGTAGGCAATGAAACTGATGCACTGC
ACTTGACGGGTGTTGTCGAATCCGATGATCCTAATGAAGGCTTCAGGGTACTCCTTCTTGCACTCCTCCACTTCCTTCAACACTTGAGCGGAGTCGGTGC
AACCGAACAAGGGAAGCTTCCACATTGTCCAGTACCTTCCATCGTAGTATCCGGGGGTGTTACCGTGCTCACGGTGCACAAACCCGTTCTATAAAAACCA
CACATGTTACAAACCAACTCAGAATTTTTTTTAAAAGAGTTCCTAATCAAATATTATACACAACAATAACAAGAAAATAGTCCAAGATCTATATTTATGT
TCAAACTTGATTACCTCCAACTCGAATTCAACACAGGGAATCCACTTGTTGCGGATAAGGTAGTCAACTTCCTTAGCCAATTCGGATTCGGTAAGGTCAG
GAAGGTAAGAGAGAGTCTCAAACTTCTTCTTTCCGATCGGAGAGGCAACCATTGTAGCGGAAGAGAGCATAGATGAAGCCATTGTTCTTCTTTACTCTTT
TGTGTGACT