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Detailed information on CNT30303870


BLAST search results

BLAST vs Swiss-Prot:
sp|P11383|RBL_WHEAT, E-value = 0.0

BLAST vs NONCODE:
NONMEST005601, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678279Triticum aestivumSetaria viridis38.6740.7995.71350forward
CNT30225281Triticum aestivumHordeum vulgare35.6996.4298.14323forward
CNT3089355Triticum aestivumVigna radiata55.1483.7282.77499forward
CNT30265852Triticum aestivumBrassica rapa11.3823.5785.44103forward
CNT30477828Triticum aestivumArabidopsis halleri41.3373.4889.84374forward
CNT30323704Triticum aestivumAsparagus officinalis32.699.3392.2295forward
CNT30578317Triticum aestivumOryza barthii32.9361.5792.28298forward

Expression of CNT30303870

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MDKLHNRSIGCLPQQQARCDSIVLCNDQDW*

Sequence

>CNT30303870
TCACTTNNNNNNNNNNACTACTGTACCGGAGTGGATATGATCTCCCCCAGACATACGCAATGCTTTAGCTAATACACGGAAATGCATACCATGATTTTTC
TGTCTATCAATAACTGCATGCATTGCACGGTGAATGTGAAGAAGTAGGCCATTGTCGCGGCAATAATGAGCCAAAGTAGTATTTGCGGTGAATCCCCCAG
TTAAGTAGTCATGCATTACAATAGGAACCCCTAATTCTCTTGCAAATACAGCTCTCTTAATCATTTCTTCACATGTACCCGCAGTCGCATTCAAGTAATG
CCCCTTGATTTCACCGGTTTCGGCCTGTGATTTATAAATAGCTTCGGCACAAAAGACAAAACGGTCTCTCCAGCGCATAAATGGTTGTGAGTTTACGTTT
TCATCATCTTTGGTAAAATCAACTCCACCACGTAGACACTCATAACACGCTCTACCATAATTTTTTGCGGATAATCCCAATTTTGGTTTAATAGTACATC
CCAATAAAGGACGACCATACTTGTTCAACTTATCTCTTTCAACTTGGATACCATGAGGCGGGCCTTGGAAAGTTTTTGAATAAGTAGGGGGAATTCGTAG
ATCCTCCAAACGTAGAGCACGTAGGGCTTTGAAACCAAATACGTTACCTACAATGGAAGTAAACATGTTAGTAACGGAACCCTCTTCAAATAGGTCTAAT
GGATAAGCTACATAACAGATCCATTGGCTGTCTTCCCCAGCAACAGGCTCGATGTGATAGCATCGTCCTTTGTAACGATCAAGACTGGTAAGTCCATCAG
TCCAAACAGTTGTCCATGTACCAGTAGAAGATTCGGCAGCTACTGCAGCCCCTGCTTCTTCGGGCGGAACCCCAGGCTGAGGACTTACTCGGAANNNNNN
NNNNC