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Detailed information on CNT30323704


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678101Asparagus officinalisSetaria viridis37.0431.2590110forward
CNT30629265Asparagus officinalisVigna unguiculata57.2415.0291.76170forward
CNT30201083Asparagus officinalisPisum sativum98.6513.7286.69293forward
CNT30183427Asparagus officinalisSecale cereale98.9910.8492.18294forward
CNT30303870Asparagus officinalisTriticum aestivum99.3332.692.2295forward
CNT30225846Asparagus officinalisHordeum vulgare91.9224.0789.74273forward
CNT30565170Asparagus officinalisActinidia chinensis98.6525.6691.13293forward
CNT3089355Asparagus officinalisVigna radiata74.7537.2584.68222forward
CNT30539441Asparagus officinalisBrassica napus98.65688.4293forward
CNT30239038Asparagus officinalisBrassica oleracea69.3616.5287.86206forward
CNT30554212Asparagus officinalisOryza glaberrima98.997.7992.18294forward
CNT30257651Asparagus officinalisAvena sativa98.9952.2291.5294forward
CNT3060115Asparagus officinalisArabidopsis lyrata74.419.3290.95221forward
CNT3017995Asparagus officinalisZea mays98.9919.0392.18294forward
CNT30681897Asparagus officinalisTriticum urartu98.9931.2191.5294forward
CNT30477828Asparagus officinalisArabidopsis halleri22.913.3695.5968forward
CNT30356508Asparagus officinalisLactuca sativa74.4131.6290.5221forward
CNT30121217Asparagus officinalisCitrus clementina98.6532.6688.4293forward

Expression of CNT30323704

Peptides detected in this lncRNA

>peptide 1 (35 aa)
GTTILVQFISFNLDTMRRALESFGISRGNSQILQT*

>peptide 2 (41 aa)
GDDHTCSIYLFQLGYHEAGLGKFWNKQGEFADPPNVELVGL*

Sequence

>CNT30323704
AGGGGACGACCATACTTGTTCAATTTATCTCTTTCAACTTGGATACCATGAGGCGGGCCTTGGAAAGTTTTGGAATAAGCAGGGGGAATTCGCAGATCCT
CCAAACGTAGAGCTCGTAGGGCTTTGAAACCAAATACATTACCCACAATGGAAGTAAACATGTTAGTAACAGAACCTTCTTCAAAAAGGTCTAAAGGATA
AGCTACATAAGCAATAAATTGCTCTGCTTCCCCAATAACGGGCTCGATGTGGTAGCATCGTCCTTTGTAACGATCAAGACTGGTAAGTCCATCAGTC