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Detailed information on CNT30302216


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 2e-118

BLAST vs NONCODE:
NONSTUT001352, E-value = 1e-32

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30189120Triticum aestivumSecale cereale93.7459.992.47584forward
CNT30395674Triticum aestivumTriticum turgidum95.836894.81597forward
CNT30441267Triticum aestivumAegilops tauschii99.6884.9590.02621forward
CNT30666302Triticum aestivumTriticum dicoccoides75.2889.6790.19469forward
CNT30686710Triticum aestivumTriticum urartu99.6869.3192.59621forward
CNT30722304Triticum aestivumTriticum spelta6196.9495.26380forward

Expression of CNT30302216

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MLTRASPKRADDDTFFTALPAKVEEERDMVVVAIGRLMKVSAV*

>peptide 2 (29 aa)
MAQRQWITSSSRFLEKVSGSAESPAVSQP*

>peptide 3 (40 aa)
TISPSGPPATRYPSTAPMSTTWHAQIARMLCACTRLGLPR*

Sequence

>CNT30302216
CAACGATCTCACCGAGTGGGCCGCCGGCAACACGGTACCCCTCGACGGCACCCATGAGCACGACCTGGCATGCCCAAATAGCTAGGATGCTTTGTGCGTG
CACTAGGCTGGGGTTGCCGAGGTAGTCGAGACCACCCTCACTAAAGATCTGGGAGCCGGCCTTGAACCAAACGGCCTCGCCAAACTTGACGCCGTTGCGG
GCGAGCAACTCAGGGAAGACACAACCAAGTGCCCCAAGCATGGCCCAGCGACAGTGGATCACCTCCAGCTCCCGGTTCTTGGAGAAGGTCTCCGGGTCAG
CCGAAAGTCCAGCAGTATCCCAACCATAATCGCCAGGGAACTCACCGGTGAGGTAGCTCGGGGGCTCACCAGAGAGTGGGCCGAGGTACAACACACGGTC
GGCACCGTACCATGGGCTGCCAGAGGAAAGCCGCTTCGCCTTCGCTGCAGTCTTGCGCATGCTGACGCGGGCCTCACCGAAGAGAGCCGATGACGACACG
TTCTTCACCGCCTTGCCGGCAAAGGTTGAGGAGGAGAGGGACATGGTGGTGGTCGCCATTGGAAGGCTGATGAAAGTGTCTGCTGTATGAATTCTCCAAT
AGACGAGTGAGTGTGGAGATGCC