Detailed information on CNT30722304


BLAST search results

BLAST vs Swiss-Prot:
sp|P06671|CB22_MAIZE, E-value = 6e-94

BLAST vs NONCODE:
NONBNAT002216, E-value = 3e-22

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30190560Triticum speltaSecale cereale99.2340.1995.37389forward
CNT30302216Triticum speltaTriticum aestivum96.946195.26380forward
CNT30225573Triticum speltaHordeum vulgare99.2324.3492.03389forward
CNT30395674Triticum speltaTriticum turgidum99.2344.3194.34389forward
CNT30441267Triticum speltaAegilops tauschii99.2353.2192.03389forward
CNT30252956Triticum speltaAvena sativa10040.5889.29392forward
CNT30667167Triticum speltaTriticum dicoccoides60.4687.7896.2237forward
CNT30139990Triticum speltaLolium perenne95.6647.7188375forward
CNT30686626Triticum speltaTriticum urartu99.2346.5993.06389forward

Expression of CNT30722304

SRR9114152: 0.0 RPKM

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAQRQWITSSSRFLEKVSGSAESPAVSQP*

>peptide 2 (44 aa)
YSGSTISPSGPPATRYPSTAPMSTTWHAQTARMLCACTRLGLPR*

Sequence

>CNT30722304
TATAGTGGGTCGACGATCTCGCCAAGTGGGCCGCCGGCAACGCGGTACCCCTCGACCGCACCCATGAGCACGACTTGGCATGCCCAAACAGCTAGGATGC
TTTGCGCGTGCACAAGGCTGGGATTGCCGAGGTAGTCAAGACCACCCTCACTAAAGATCTGGGAGCCGGCCTTGAACCAAACGGCCTCGCCAAACTTAAC
GCCATTGCGGGCGAGCAACTCAGGGAAGACACAACCAAGTGCCCCAAGCATGGCCCAACGACAGTGGATCACCTCCAGCTCCCGGTTCTTGGAGAAGGTC
TCTGGGTCAGCTGAAAGTCCGGCAGTGTCCCAACCATAATCGCCAGGGAACTCACCGGTGAGGTAGCTCGGGGGCTCACCGGAGAGTGGGCC