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Detailed information on CNT30686710


BLAST search results

BLAST vs Swiss-Prot:
sp|P27497|CB29_MAIZE, E-value = 1e-167

BLAST vs NONCODE:
NONMTRT001605, E-value = 2e-41

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30534338Triticum urartuEucalyptus grandis69.4255.1983.92622forward
CNT30616124Triticum urartuSesamum indicum73.2157.4983.08656forward
CNT30302216Triticum urartuTriticum aestivum69.3199.6892.59621forward
CNT30395674Triticum urartuTriticum turgidum94.5396.4796.93847forward

Expression of CNT30686710

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MVTRASPKRADDDTFFTALLAKVEEERDMVVVAIGRLSKLSTVRILQGMSECGDALI*

>peptide 2 (75 aa)
PGTKLVANAHALLLTGSAMWSARFSSGPLPVTIAWTKKPNIENMARRPFLISFTLSSANASGSSANPRGSKLPPG*

>peptide 3 (38 aa)
MPQGRQPTQEGRSCRLGRVGRRSHRVGHRQRGTPRRHP*

>peptide 4 (41 aa)
AGDKVGGKCPCIVVDGVGDVVSEVLEWALARDDSLDKEAKH*

>peptide 5 (29 aa)
MAQRQWITSSSRFLAKVSGSAESPAVSHP*

Sequence

>CNT30686710
GCCGGGGACAAAGTTGGTGGCAAATGCCCATGCATTGTTGTTGACGGGGTCGGCGATGTGGTCAGCGAGGTTCTCGAGTGGGCCCTTGCCCGTGACGATA
GCTTGGACAAAGAAGCCAAACATTGAGAACATGGCAAGGCGACCGTTCTTGATCTCCTTCACCTTGAGCTCGGCGAATGCCTCAGGGTCGTCAGCCAACC
CAAGAGGGTCGAAGCTGCCGCCTGGGTAGAGTGGGTCGACGATCTCACCGAGTGGGCCACCGGCAACGCGGTACCCCTCGACGGCACCCATGAGCACGAC
CTGGCATGCCCAAATAGCAAGGATGCTTTGTGCGTGGACGAGGCTGGGGTTGCCGAGGTAATCGAGACCACCCTCACTAAAGATTTGAGAGCCGGCCTTG
AACCAAACAGCCTCACCGAAGTTGACGTCGTTGTGGGCGAGCAACTCAGGGAAGACACAACCAAGTGCCCCGAGCATGGCCCAGCGGCAATGGATCACCT
CCAGCTCCCGGTTCTTGGCGAAGGTCTCGGGGTCAGCTGAAAGTCCGGCAGTGTCCCACCCATAGTCGCCTGGGAACTCACCAGTGAGGTAGCTCGGGGG
CTCACCGGAGAGTGGGCCGAGGTACAACACACGGTCGGCACCGTACCATGGGCTGTCAGAGGAAACCTGCTTTGCCTTCGCTGCAGTTTTGCGCATGGTG
ACGCGGGCCTCGCCGAAGAGAGCCGATGACGACACGTTCTTCACCGCCTTGCTGGCAAAGGTCGAGGAGGAGAGGGACATGGTGGTGGTTGCCATTGGAA
GGCTGAGCAAATTGTCTACTGTACGGATTCTCCAAGGGATGAGTGAGTGTGGAGATGCCTTGATATGAGAGGGGGAGGTGGCTACTTATGGCAACG