Detailed information on CNT30395674


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 6e-174

BLAST vs NONCODE:
NONMTRT001605, E-value = 1e-32

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30302216Triticum turgidumTriticum aestivum6895.8394.81597forward
CNT30253260Triticum turgidumAvena sativa91.2378.2288.01801forward
CNT30140466Triticum turgidumLolium perenne91.2375.0787.14801forward
CNT30686710Triticum turgidumTriticum urartu96.4794.5396.93847forward
CNT30722304Triticum turgidumTriticum spelta44.3199.2394.34389forward

Expression of CNT30395674

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MPLRASNSGKTQPSAPSMAQRQWITSNSRFLEKVSGSAESPAVSQP*

>peptide 2 (38 aa)
MPQGRQPTQEGRSCRLGRVGRRSHSVGHRQRGTPRRHP*

>peptide 3 (85 aa)
GEHSLKTPYLPGTKLVANAHALLLTGSAMWSARFSSGPLPVTIAWTKKPNIENMARRPFLISFTLSSANASGSSANPRGSKLPPG*

>peptide 4 (51 aa)
WRAQSQDTLLAGDKVGGKCPCIVVDGVGDVVSEVLEWALARDDSLDKEAKH*

>peptide 5 (50 aa)
MVTRASPKRVDDDTFFTALLAKVEEERDMVVVAIGRLSKLSTVWILQGMSE

Sequence

>CNT30395674
ATGGCGAGCACAGTCTCAAGACACCTTACTTGCCGGGGACAAAGTTGGTGGCAAATGCCCATGCATTGTTGTTGACGGGGTCGGCGATGTGGTCAGCGAG
GTTCTCGAGTGGGCCCTTGCCCGTGACGATAGCTTGGACAAAGAAGCCAAACATTGAGAACATGGCAAGGCGACCGTTCTTGATCTCCTTCACCTTGAGC
TCGGCGAATGCCTCAGGGTCGTCAGCCAACCCAAGAGGGTCGAAGCTGCCGCCTGGGTAGAGTGGGTCGACGATCTCACTCAGTGGGCCACCGGCAACGC
GGTACCCCTCGACGGCACCCATGAGCACGACCTGGCATGCCCAAATAGCAAGGATGCTTTGTGCGTGGACGAGGCTGGGGTTGCCGAGGTAGTCGAGACC
GCCCTCACTAAAGATCTGGGAGCCGGCCTTGAACCAAACAGCCTCGCCGAACTTGATGCCGTTGCGGGCGAGCAACTCAGGGAAGACACAACCAAGTGCC
CCAAGCATGGCCCAACGACAGTGGATCACCTCCAACTCCCGGTTCTTGGAGAAGGTCTCCGGGTCAGCCGAAAGTCCGGCAGTGTCCCAACCATAATCGC
CAGGGAACTCACCGGTGAGGTAGCTCGGGGGCTCACCGGAGAGTGGGCCGAGGTACAACACACGGTCGGCACCGTACCATGGGCTGCCAGAGGAAACCTG
CTTTGCCTTCGCTGCAGTTTTGCGCATGGTGACGCGGGCCTCGCCGAAGAGAGTCGATGACGACACGTTCTTCACCGCCTTGCTGGCAAAGGTCGAGGAG
GAGAGGGACATGGTGGTGGTTGCCATTGGAAGGCTGAGCAAATTGTCTACTGTATGGATTCTCCAAGGGATGAGTGAG