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Detailed information on CNT30288286


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30490066Triticum aestivumOlea europaea20.391381.03116forward
CNT30385999Triticum aestivumTriticum turgidum62.0466.48100353forward
CNT30436771Triticum aestivumAegilops tauschii24.2525.2797.1138forward
CNT30243463Triticum aestivumAvena sativa28.4730.9888.27162forward
CNT30658162Triticum aestivumTriticum dicoccoides62.0463.38100353forward
CNT30465116Triticum aestivumSaccharum spontaneum37.7938.3294.88215forward
CNT30680437Triticum aestivumTriticum urartu36.3839.7399.52207forward
CNT30346859Triticum aestivumEragrostis tef38.4949.5594.52219forward
CNT30356846Triticum aestivumLactuca sativa22.1424.5182.54126forward
CNT30481607Triticum aestivumChara braunii35.1533.1781.5200forward
CNT30594547Triticum aestivumEragrostis curvula30.0534.6994.74171forward
CNT30558465Triticum aestivumPanicum hallii17.935194.12102forward

Expression of CNT30288286

Peptides detected in this lncRNA

>peptide 1 (79 aa)
MPPSGVHFHWSATMSARSTTDTLGVGTRSAIPLSLPLRLGSTSATALAAPVEVGTMLSAAARARRRSRWLASSSLWSPV*

Sequence

>CNT30288286
GATCATGCATGTTTAGATAGCAGTAAAGGTCAAAACGATGGAAATGTTCGAAGAACAAGTTGAATTCTACATCAGAACCTGGCAAACGATAGTATATATT
ACAGATGCACAGCGTTGAGACTTCCTTTGCAGGAAGTCTATTATAATCCGTGTCTGGACACTGAAAAATCAGAGAAAGAAAAAAGAAGAACAAGAAAAGA
AAGGAAAAAAAAGAAGCTGTTGGGAGCTCGATACTTCGAATTCTCATTACAAAGAATCGATCATCCGTGACGATGGCTGGGGAAAATTTCGAGAGGAGTC
ACTTCACAGGGCAATAATGCCGCCGTCCGGCGTTCACTTCCATTGGTCGGCGACGATGTCGGCGAGGTCGACGACGGACACGTTGGGGGTGGGCACCCGG
AGCGCGATCCCGTTGAGCTTGCCCTTGAGGTTGGGCAGCACCAGCGCCACGGCCTTGGCCGCGCCGGTGGAGGTGGGCACGATGTTGAGCGCGGCGGCAC
GGGCACGGCGCAGGTCGCGGTGGCTCGCGTCCAGCAGCCTCTGGTCGCCGGTGTAGGAGTGGGTTGTGG