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Detailed information on CNT30286102


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FRA7|Y5513_ORYSJ, E-value = 7e-35

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30384070Triticum aestivumTriticum turgidum100.4754.9796.06431forward
CNT30656858Triticum aestivumTriticum dicoccoides100.4755.1296.06431forward
CNT30473529Triticum aestivumSaccharum spontaneum35.213.7882.12151forward
CNT30130675Triticum aestivumLolium perenne77.8648.0686.23334forward
CNT30367958Triticum aestivumSorghum bicolor26.8110.0683.48115forward
CNT30604140Triticum aestivumOryza punctata30.5420.5383.21131forward
CNT30556972Triticum aestivumPanicum hallii29.8429.2282.03128forward

Expression of CNT30286102

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MGCISGAVAGAVSAAGLAKTLAMRSVGTSGRRFRAAQASAALRSATGS*

Sequence

>CNT30286102
TACCACTGTCCACCACAAGCCAAACAAGACACTACAACGAGATACTGACTCCTACAGCTATTAGGTAATAATAGAACTCCGGGTAGCTCTTATTGTTACT
GCGTCGGGATGGGCTGCATCTCAGGAGCTGTGGCAGGCGCAGTGTCGGCGGCCGGGTTGGCGAAAACCCTTGCAATGCGCTCAGTTGGGACGAGCGGGAG
GCGGTTCAGGGCGGCCCAGGCTTCAGCAGCCTTGCGCTCCGCCACAGGCTCATAGCGGGTATACAAGTCACGGGCCTTTGGCTCAGCACGAGCAATGGCC
GACTTGGCCAGGCCAGTTGCTGTGCCCATTATGCCTGTCTTCTGCACCTCAGCTGCTGCAGAGCGAGCATAGGTCGGCACCTCTTTCACGACCGGCGGGA
CACGACGATCCAGCTCCTGGACAGACTCG