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Detailed information on CNT30130675


BLAST search results

BLAST vs Swiss-Prot:
sp|A2Y0H2|Y5513_ORYSI, E-value = 1e-42

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30286102Lolium perenneTriticum aestivum48.0677.8686.23334forward
CNT30384070Lolium perenneTriticum turgidum48.3542.8686.61336forward
CNT30656858Lolium perenneTriticum dicoccoides49.2143.7386.55342forward
CNT30473529Lolium perenneSaccharum spontaneum23.614.9681.71164forward
CNT30679464Lolium perenneTriticum urartu29.0629.7988.61202forward
CNT30604140Lolium perenneOryza punctata18.8520.5383.21131forward
CNT30556972Lolium perennePanicum hallii13.3821.2383.8793forward

Expression of CNT30130675

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MLQHSTSHLHTHAETVVTSTRQPSSQDTTQDTSY*

>peptide 2 (83 aa)
MKLSSLLRRDGLHLRSRGGSSVGRRVGEHPRDALRGDKRETVEGSPSFSSLALRHRLVAGVEVASLWLSASNGRLGQAGGGAN*

>peptide 3 (44 aa)
MVNVQMDYSYNLDLEHYKWFMQQTKTQSRCCSTVQVTSIHMQKP*

Sequence

>CNT30130675
CTGGCTCGCCATTAGAGCAATGGAGTCTAAATACATTCAAGGAATTGTTACGAAGAATGAGAAATAACTGAGTTATACAACAGACACAGCAAATGGTGAA
TGTACAGATGGATTATTCATATAATTTGGATTTAGAACATTACAAATGGTTCATGCAACAAACTAAAACTCAAAGCAGATGTTGCAGCACAGTACAAGTC
ACCTCCATACACATGCAGAAACCGTAGTAACATCCACACGACAACCCAGTTCACAAGACACTACACAAGATACTAGCTACTAGGGAGTAACATAATTCAG
GCTTGATGAAATTATCATCATTACTGCGTCGGGATGGGCTGCATCTCAGGAGCCGAGGTGGCAGCAGCGTCGGTAGGCGGGTAGGAGAACACCCTCGCGA
TGCGCTCCGTGGGGACAAGCGGGAGACGGTTGAGGGCAGCCCAAGCTTCAGCAGCCTTGCGCTCCGCCACAGGCTCGTAGCGGGTGTAGAGGTCGCGAGC
CTTTGGCTCAGCGCGAGCAATGGCAGACTTGGCCAGGCCGGTGGCGGTGCCAACTAAGCCAGTCTTGTGCACCTCAGCCGCCGCAGAGCGGGCATAGGTC
GGCACCTCCTTCACAACCGGGGGGACACGGCGGTCCAGCTCCTGGACAGACTCGTCGACCTGACAAATTGAACATTCAGCATCAGTGAGACCGTT