Detailed information on CNT3086307


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30154231Vigna radiataPrunus persica21.5929.1785.7198reverse complement
CNT30569890Vigna radiataVitis vinifera21.3716.0188.6697reverse complement
CNT3021894Vigna radiataPopulus trichocarpa22.0328.5784100reverse complement
CNT30726090Vigna radiataLupinus angustifolius20.4813.1582.893reverse complement

Expression of CNT3086307

Peptides detected in this lncRNA

>peptide 1 (38 aa)
GRGRVEKEEYEEKLKEVEAVCNPIISAVYQRSGGAPEC*

>peptide 2 (86 aa)
EDGDVLRKKNMRRSLRRWKPFAIQSSVLCIKDQEEPQSVEKEEYEEKLKEVEAVCNPIISAVYQRSGGAPGGGASGEDDDDSHDEL*

>peptide 3 (54 aa)
MRRSLRRWKPFATQSSVLCIRDQEEPQVVVHQVRTMMILMTSSRNVRYNLACVC*

Sequence

>CNT3086307
GAGGACGGGGACGTGTTGAGAAAGAAGAATATGAGGAGAAGCTTAAGGAGGTGGAAGCCGTTTGCAATCCAATCATCAGTGCTGTGTATCAAAGATCAGG
AGGAGCCCCAGAGTGTTGAGAAAGAAGAATATGAGGAGAAGCTTAAGGAGGTGGAAGCCGTTTGCAACCCAATCATCAGTGCTGTGTATCAGAGATCAGG
AGGAGCCCCAGGTGGTGGTGCATCAGGTGAGGACGATGATGATTCTCATGACGAGCTCTAGAAATGTTCGCTATAACTTGGCTTGTGTCTGCTGATGAAG
CAGTAGCATGCAAAGATTGAGCAGTAGAGTAGGTTAGTCGGAGTTTTAAATTTTTTATGATGGAAGTTGAGAGTCTCCTAGCTCTTGTATTTTTGGTGTC
CAAAATACATTGAATATAAATACTTTAATTTGTTTTAAGATTAGAACTAAAACA