Detailed information on CNT30146591


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30708286Medicago truncatulaGlycine max88.4654.1284.35230reverse complement
CNT30283743Medicago truncatulaTriticum aestivum20.384.6692.4553forward
CNT3082972Medicago truncatulaBrassica juncea202.5594.2352forward
CNT30605830Medicago truncatulaGossypium raimondii47.6920.1387.9124reverse complement
CNT30416518Medicago truncatulaPapaver somniferum20.3812.5396.2353forward
CNT30319150Medicago truncatulaAsparagus officinalis20.380.994.3453reverse complement

Expression of CNT30146591

Peptides detected in this lncRNA

>peptide 1 (30 aa)
EVPRLICLALNRLSIHLINISNPLWILFDV*

Sequence

>CNT30146591
GAGGTCCCTAGACTCATTTGCCTAGCATTGAATAGATTAAGTATTCACCTTATCAATATCTCAAATCCATTATGGATTTTATTTGACGTCTAAATCCTTT
GTCAGGCTATTGTTCTCTTATTTTATTCCTGGAGTAAGACATGGATTTCTCAATAAGATCAACTCTTTTAATTACATGATGGACTCCTATGAAAAAAAAA
CATTGGCGCGTGTGTAAACGAGGTGCTCTACCAACTGAGCTATAGCCCTTGTGCTTTTGA