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Detailed information on CNT30101097


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39176|ERLI1_ARATH, E-value = 5e-20

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30552987Oryza rufipogonOryza glaberrima49.871.2897.57494forward
CNT30447788Oryza rufipogonSaccharum spontaneum21.4736.7286.38213forward
CNT30367039Oryza rufipogonSorghum bicolor21.4736.4182.63213forward
CNT30105270Oryza rufipogonOryza longistaminata48.4992.6893.56481forward
CNT30575856Oryza rufipogonOryza barthii53.2358.3497.54528forward
CNT30593838Oryza rufipogonEragrostis curvula16.4322.0992.02163forward

Expression of CNT30101097

Peptides detected in this lncRNA

>peptide 1 (64 aa)
WDRWIEQELASTVCVELTGMQKRRDAVRTDAYTMRSIEYKLINQLCRYTYTSRRMKHALITSWN*

>peptide 2 (89 aa)
MGRLRLMPRMLARRAVQRHTAASRSARPWMRLQHGCRGGVPSCTFISPFSTFRARSVAITPAFVAMPTHRTAPADRSRSMAWPLPSFAC*

Sequence

>CNT30101097
TGGGACCGATGGATCGAACAAGAGCTAGCTAGTACAGTATGTGTAGAATTAACAGGCATGCAGAAAAGACGAGATGCAGTACGTACTGATGCATATACGA
TGAGATCCATCGAGTACAAATTAATTAATCAATTATGCAGATACACATATACAAGTAGACGAATGAAGCATGCTTTAATTACGTCGTGGAACTGAATCAT
ATGCATGCATATATATCTCATTAATTTACGGGATGAAGGAGGAAATTAAGGCACGCAGATACATATGATGATTTGAACAAGGAACAAACTAGACATAGAT
AGATATATAGTTGTACGTGGCCTGGTGGTCGTTCTTGTGTGTAGCAAGCAGTGAAGTAGAATGGAGCAGCAGCTATATTAGTTGCTGCACTGGAAGCCGG
AGGGGACGGAGCGGCCGCAGTAGTTGACGAGGAGGCTGAGGTTGATGGGGAGGTTGAGGTTGATGCCAAGGATGTTGGCGCGGAGGGCGGTGCAGAGGCA
CACGGCGGCCTCAAGGTCGGCGAGGCCCTGGATGAGGCTGCAACACGGCTGCCGCGGCGGCGTCCCCAGCTGCACGTTTATCAGCCCATTCAGCACGTTC
AGGGCCAGGAGCGTGGCGATCACCCCAGCTTTCGTCGCCATGCCCACCCACCGCACTGCACCTGCAGATCGATCTCGATCTATGGCCTGGCCTCTACCTA
GCTTTGCTTGCTAGCCAGTGTATTCAGATACATCTATGGACCAAGGGGTGCACTCATATTTATAATAGGATCGGAGTACCTTCAATTACTTAACCAGCTA
CCACATCACTTAACTAACTAATTAACTAATCGGATTTTAACTAGGATTTCATCTTAGGTGCAGCTCACATCACTACAGCGTAACTACTACTAGTGACCTA
GCTAGCTAGCTGGCCTGGAGTACATTAATTCATTGGAGTATAGTGCTACTAGCTAGTGGGCTTTTGGTAGCTTAGCTGGCCGCAAGGACGAT