SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 6661 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30260875 Brassica rapa A03:1181175-1181874 (+) noncoding (-0.0004096)- - 3.08 1
CNT30260874 Brassica rapa A03:8551897-8552354 (-) noncoding (-0.10281)- 90 5.75 2
CNT30260873 Brassica rapa A03:16157449-16158850 (-) noncoding (-0.004096)7e-66 (sp|P46310|FAD3C_ARATH) 66 26.99 1
CNT30260872 Brassica rapa A03:12950130-12954596 (+) noncoding (-0.131072)8e-42 (sp|E9KBR8|C9B16_SOYBN) 57 48.11 2Conserved counterparts:
CNT30260871 Brassica rapa A03:21080653-21081167 (+) noncoding (-0.0004096)- 43 7.58 2
CNT30260870 Brassica rapa A03:22119791-22120871 (+) coding (0.201)- 97 5.95 3
CNT30260869 Brassica rapa A03:16235236-16235883 (+) noncoding (-0.0004096)- 39 80.46 1
CNT30260868 Brassica rapa A03:10450600-10451406 (+) coding (0.093)- 64 4.79 3
CNT30260867 Brassica rapa A03:6548024-6548622 (+) noncoding (-0.147456)- 32 5.68 2
CNT30260866 Brassica rapa A03:22559602-22559878 (-) noncoding (-0.016384)- 68 3.84 2
CNT30260865 Brassica rapa A03:30708296-30708884 (+) coding (0.414)- 87 98.14 2
CNT30260864 Brassica rapa A03:4749926-4750515 (-) noncoding (-0.004096)- 59 10.68 1
CNT30260863 Brassica rapa A03:2779276-2779707 (-) noncoding (-0.127795)- 87 29.37 2
CNT30260862 Brassica rapa A03:17162239-17162745 (-) noncoding (-0.0421888)- 41 54.84 2Conserved counterparts:
CNT30260861 Brassica rapa A03:28668287-28672594 (-) noncoding (-0.045056)3e-57 (sp|Q9S7I8|CDC22_ARATH) 49 7.15 2Conserved counterparts:
CNT30260860 Brassica rapa A03:11538162-11538873 (-) noncoding (-0.142541)- 72 0.4 3
CNT30260859 Brassica rapa A03:12695485-12696267 (+) noncoding (-0.028672)5e-83 (sp|Q8L7I1|Y4193_ARATH) 44 8.31 2
CNT30260858 Brassica rapa A03:21080425-21080898 (-) noncoding (-0.0004096)- 54 1.88 2
CNT30260857 Brassica rapa A03:10380809-10382030 (-) noncoding (-0.124928)- 75 45.11 3Conserved counterparts:
CNT30260856 Brassica rapa A03:5119274-5123389 (-) noncoding (-0.04096)- 48 2.89 1
CNT30260855 Brassica rapa A03:10163215-10164977 (-) noncoding (-0.032768)- 52 21.9 5
CNT30260854 Brassica rapa A03:23840115-23840666 (-) noncoding (-0.0004096)- - 2.07 1
CNT30260853 Brassica rapa A03:13306713-13307838 (-) coding (0.094)7e-160 (sp|P0CH33|UBQ11_ARATH) 53 2.45 2Conserved counterparts:
CNT30260852 Brassica rapa A03:1045675-1046840 (-) noncoding (-0.0004096)- 48 1014.93 2Conserved counterparts:
CNT30260851 Brassica rapa A03:1035613-1036383 (+) noncoding (-0.0004096)- 39 3.68 1
CNT30260850 Brassica rapa A03:1209704-1220893 (-) noncoding (-0.188416)2e-72 (sp|Q9M5J8|PGIP2_ARATH) 41 9.18 3
CNT30260849 Brassica rapa A03:16364388-16365424 (+) coding (0.166)- 63 15.15 5
CNT30260848 Brassica rapa A03:27312145-27314089 (+) noncoding (-0.008192)- 85 3.48 2
CNT30260847 Brassica rapa A03:20536112-20537122 (-) noncoding (-0.14336)- 69 1.39 2
CNT30260845 Brassica rapa A03:1213809-1221504 (-) noncoding (-0.180224)4e-34 (sp|Q9M5J9|PGIP1_ARATH) - 13.28 2
CNT30260844 Brassica rapa A03:19269081-19271093 (-) noncoding (-0.0004096)- 60 20.28 2
CNT30260843 Brassica rapa A03:3278905-3279330 (+) noncoding (-0.0004096)- 35 11.51 2
CNT30260842 Brassica rapa A03:18318267-18318557 (-) noncoding (-0.028672)- 36 80.48 1
CNT30260841 Brassica rapa A03:4220121-4221680 (-) noncoding (-0.02048)- 45 22.75 2
CNT30260840 Brassica rapa A03:29160566-29161130 (+) noncoding (-0.0004096)- 45 0.92 2
CNT30260839 Brassica rapa A03:12556686-12559728 (+) coding (0.034)- 80 1.14 3
CNT30260838 Brassica rapa A03:24546772-24547701 (+) noncoding (-0.0618496)- 49 5.52 3
CNT30260837 Brassica rapa A03:10380809-10382030 (-) noncoding (-0.149504)- 87 23.93 3Conserved counterparts:
CNT30260836 Brassica rapa A03:15745683-15746740 (+) noncoding (-0.008192)0.0000000002 (sp|Q93VI0|S1FA3_ARATH) 74 63.3 2
CNT30260835 Brassica rapa A03:1901479-1904490 (-) noncoding (-0.057344)- 66 2.65 3Conserved counterparts:
CNT30260834 Brassica rapa A03:5687402-5688487 (-) noncoding (-0.139264)- 62 8.18 2
CNT30260833 Brassica rapa A03:7591122-7592445 (+) noncoding (-0.004096)- 88 63.52 3
CNT30260832 Brassica rapa A03:14860851-14861681 (-) noncoding (-0.0004096)- 45 4.33 1
CNT30260831 Brassica rapa A03:31557292-31561627 (+) coding (0.129)- 81 3.85 1Conserved counterparts:
CNT30260830 Brassica rapa A03:22277664-22278123 (-) noncoding (-0.077824)- - 3.41 2Conserved counterparts:
CNT30260829 Brassica rapa A03:5677336-5677835 (-) noncoding (-0.0004096)- 31 15.61 1
CNT30260828 Brassica rapa A03:1213736-1221623 (-) noncoding (-0.028672)- - 5.16 3
CNT30260827 Brassica rapa A03:24945525-24947294 (+) noncoding (-0.0016384)0.00000000000008 (sp|Q9LNU4|PSD3A_ARATH) 59 12.63 4
CNT30260826 Brassica rapa A03:1323099-1327342 (+) noncoding (-0.077824)- 73 4.09 4
CNT30260825 Brassica rapa A03:17247014-17248277 (-) noncoding (-0.0221184)- 59 6.99 2