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Detailed information on CNT30156153


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532887Pistacia veraEucalyptus grandis78.4733.5783.19904forward
CNT30516063Pistacia veraJuglans regia57.8167.4184.68666forward
CNT30701594Pistacia veraQuercus lobata76.9186.3582.96886forward
CNT30279009Pistacia veraChenopodium quinoa77.658.5184.56894forward
CNT30727227Pistacia veraCorchorus capsularis59.5559.786.15686forward
CNT30379426Pistacia veraManihot esculenta79.1778.7685.42912forward
CNT30629220Pistacia veraVigna unguiculata76.9182.0484.09886forward
CNT3094992Pistacia veraSolanum tuberosum76.7475.9584.62884forward
CNT30562225Pistacia veraActinidia chinensis59.7276.8784.59688forward
CNT30511508Pistacia veraSolanum lycopersicum74.3965.5284.01857forward
CNT30145547Pistacia veraMedicago truncatula74.3943.0784.25857forward
CNT30311191Pistacia veraCamelina sativa75.1777.1883.6866forward
CNT3061767Pistacia veraArabidopsis lyrata76.4853.9584.45881forward
CNT30605652Pistacia veraGossypium raimondii79.69384.73917forward
CNT30652253Pistacia veraRosa chinensis78.7369.8884.67907forward
CNT30480747Pistacia veraArabidopsis halleri75.6175.0984.16871forward
CNT30429148Pistacia veraPapaver somniferum73.2662.9483.06844forward
CNT30642981Pistacia veraCannabis sativa78.4780.5782.74904forward
CNT3026527Pistacia veraPopulus trichocarpa78.7392.8484.79907forward
CNT30321313Pistacia veraAsparagus officinalis75.2666.1383.16867forward
CNT30120072Pistacia veraCitrus clementina70.0569.3990.95807forward
CNT30603625Pistacia veraOryza punctata74.9165.8383.31863forward
CNT30111771Pistacia veraFicus carica76.4870.7184.34881forward
CNT30726149Pistacia veraLupinus angustifolius76.2246.1183.14878forward

Expression of CNT30156153

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSRVIVFPVRVFTKICIPPLRRRTK*

>peptide 2 (61 aa)
MTNSETPTETEHKMQGGLLLNVVISKGPSILKLLPSKNQPLLVWWDPLLILDLSLNIVNGI*

>peptide 3 (44 aa)
MPSLSCILALTLSIVSELSTSKVMVFPVRVFTKICIPPLSRRTK*

>peptide 4 (37 aa)
MVSELSTSKVMVFPVRVFTKICIPPRRRRTKWRVDSF*

Sequence

>CNT30156153
CATAATATGTATTTATTTAATATAAGTTCTTAGAACTGATATACATGATCTAAAGAACGCCCATATCAGCATCTAAGAAACACAGCGCAAAAAGCATAAA
AACTAAAAAACTTAAAATAGAGTTTTTACAACTTATTTAAGACATTAAATATTGGCCAGCGGCCAGACCACACCACACAAACAACCACATATCCAACATA
ATGGAAACAAACCAGATTCAAATAAGCACATGACCAATTCAGAAACCCCCACGGAGACGGAGCACAAGATGCAGGGTGGACTCCTTCTGAATGTTGTAAT
CAGCAAGGGTCCTTCCATCCTCAAGCTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTATCCTGGATCTTAGCCTTAACATT
GTCAATGGTATCTGAACTCTCAACCTCCAAGGTAATGGTCTTCCCAGTGAGGGTCTTCACAAAAATCTGCATACCACCTCGGAGACGAAGAACCAAGTGG
AGGGTTGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTACGACCATCCTCAAGTTGTTTACCGGCAAAGATCAGCCTCTGCTGGTCCGGTGGGATGCCCT
CCTTGTCCTGTATCTTGGCCTTAACATTGTCAATAGTGTCAGAGCTCTCAACTTCCAAGGTAATGGTTTTTCCAGTAAGGGTTTTCACAAAGATCTGCAT
ACCACCCCTGAGTCGAAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGTGTGCGTCCATCCTCAAGTTGTTTGCCAGCGAAGATA
AGCCTCTGCTGGTCTGGTGGGATTCCTTCCTTATCCTGAATTTTGGCTTTGACATTGTCAATGGTGTCAGAGCTTTCCACCTCAAGGGTGATTGTCTTTC
CAGTGAGGGTTTTCACGAAGATCTGCATACCACCCCTTAGACGGAGGACCAAGTGAAGGGTTGACTCTTTCTGGATGTTATAATCTGCAAGTGTACGCCC
ATCCTCGAGTTGTTTACCAGCAAAGATAAGCCTTTGCTGGTCTGGCGGGATCCCTTCCTTGTCCTGAATTTTGGCCTTGACATTGTCAATGGTGTCAGAG
CTTTCAACCTCAAGGGTGATTGTCTTTCCGGTGAGAGTTTTCACAAAGATTT