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Detailed information on CNT30726082


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39043|BIP2_ARATH, E-value = 5e-73

BLAST vs NONCODE:
NONATHT003784, E-value = 3e-81

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30184977Lupinus angustifoliusSecale cereale27.5655.8684.68124forward
CNT30304204Lupinus angustifoliusTriticum aestivum27.5654.3984.68124forward
CNT30565287Lupinus angustifoliusActinidia chinensis52.8971.6985.29238forward
CNT30311641Lupinus angustifoliusCamelina sativa8099.7285.28360forward
CNT30480504Lupinus angustifoliusArabidopsis halleri39.3353.9684.18177forward

Expression of CNT30726082

Peptides detected in this lncRNA

>peptide 1 (29 aa)
PLKMPPCTAAPYATASSGFTPLFGSFPSK*

>peptide 2 (41 aa)
LHLKCLLVLQHHMRLPHQGSHPCLALFPQSSPSRVVVPLES*

Sequence

>CNT30726082
CTCCACTTAAAATGCCTCCTTGTACTGCAGCACCATATGCGACTGCCTCATCAGGGTTCACACCCTTGTTTGGCTCTTTTCCCTCAAAGTAGTCCTTCAA
GAGTTGTTGTACCTTTGGAATCCTAGTACTTCCACCAACAAGTACTATCTCGTCAATCTGGTTCTTCTGTAATCCAGCATCATCCATTGCCTTCTTCACT
GGCCCCATTGTCTTGCGGAACAATCATTGTTCAACTCCTCGAACCGAGCTCGGGTAAGTGGCTCAGAGAGATCAACACCATCAAAAAGAGATTCAATTTC
CACACGGACTTGGTGCTGGCTACTGAGAGCTCTCTTTGCACGCTCACTTTCTCTCCTCAGCTTGCCAAGAGCTCTGTTGTCCTTGCTGATATCCTTTCCG
TGCTTTTTCTTGATCAATTTAATGAAGTAATCCATTATTCTGTGATCAAA