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Detailed information on CNT30480504


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30565287Arabidopsis halleriActinidia chinensis21.3421.0885.7170forward
CNT30311641Arabidopsis halleriCamelina sativa53.9649.0397.74177forward
CNT3041011Arabidopsis halleriChlamydomonas reinhardtii21.6525.2788.7371forward
CNT30726082Arabidopsis halleriLupinus angustifolius53.9639.3384.18177forward

Expression of CNT30480504

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MSFWCFFLINLMKYSMILWSKSSPAQITTTKAIVYY*

>peptide 2 (37 aa)
HHQRETQSLHGLGADYLELSLPSHIPFGAYQEPCCPC*

Sequence

>CNT30480504
AACACCATCAAAGAGAGACTCAATCTCTACACGGACTTGGTGCTGACTACTTAGAGCTCTCTTTGCCCTCTCACATTCCCTTCGGAGCTTACCAAGAGCC
TTGTTGTCCTTGCTGATGTCCTTCTGGTGCTTCTTCTTAATCAACTTGATGAAGTACTCCATGATCCTGTGGTCAAAGTCCTCACCTGCACAGATCACAA
CAACAAAAGCAATAGTCTATTATTGAACACAATGTAATTCAAAACAATTCATTCGTGGTCACAAGTATATTACCTCCCAAGTGAGTGTCACCATTTGTGG
AGAGAACCTCGAACACTCCGTTATCAAT