Detailed information on CNT30311641


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30565287Camelina sativaActinidia chinensis37.1240.3685.07134forward
CNT30480504Camelina sativaArabidopsis halleri49.0353.9697.74177forward
CNT30726082Camelina sativaLupinus angustifolius99.728085.28360forward

Expression of CNT30311641

Peptides detected in this lncRNA

>peptide 1 (87 aa)
MAFFTGPMVFLNKSLFSSSKRALVSGSEKSTPSKSDSISTRTWCWLLRALFALSHSLRSLPRALLSLLMSFWCFFLINLMKYSMILWS

>peptide 2 (42 aa)
CPSIIAEPLGSWCFHRQGRSHRSGSSVDQHHPWPSSLVPWSS*

Sequence

>CNT30311641
TGTCCTTCAATAATTGCTGAACCTTTGGGATCCTGGTGCTTCCACCGACAAGGACGATCTCATCGATCTGGCTCTTCTGTAGACCAGCATCATCCATGGC
CTTCTTCACTGGTCCCATGGTCTTCCTGAACAAGTCATTGTTCAGCTCCTCGAAACGAGCTCTGGTGAGTGGCTCAGAGAAATCAACACCATCAAAGAGT
GACTCAATCTCTACACGGACTTGGTGCTGGCTACTAAGAGCTCTCTTTGCCCTCTCACATTCCCTTCGGAGCTTACCAAGAGCCTTGTTGTCCTTGCTGA
TGTCCTTCTGGTGCTTCTTCTTGATCAACTTGATGAAGTACTCCATGATCCTGTGGTCAAA