Detailed information on CNT30708364


BLAST search results

BLAST vs Swiss-Prot:
sp|Q93VB8|RS22_ARATH, E-value = 3e-76

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691889Glycine maxOryza sativa62.2794.8182.85274forward
CNT30372448Glycine maxArabidopsis thaliana27.0526.9283.19119forward
CNT30157936Glycine maxPistacia vera7014.6381.82308forward
CNT30235898Glycine maxBrassica oleracea46.8235.2781.07206forward
CNT30440750Glycine maxAegilops tauschii26.1423.8684.35115forward
CNT30227885Glycine maxAnanas comosus17.2722.4985.5376forward
CNT30153003Glycine maxPrunus persica12.7326.1792.8656forward
CNT30434240Glycine maxPapaver somniferum63.8636.1280.78281forward

Expression of CNT30708364

Peptides detected in this lncRNA

>peptide 1 (96 aa)
VAKGLGGSPGGGENIINTSKLQHLLGNPSRHNPGTPRRGNHPNGNGPTLPGNLARNGVGLPNLVPPVTPPHGNNRKLRENNRATNCGGHFLAALHA*

>peptide 2 (66 aa)
LPRVLVDPLEEVKTSSIPANCSTFLGTLAATIPEPLGAGTILTVTDPHFPVTLHGTVWGFPILFPQ*

Sequence

>CNT30708364
GTTGCCAAGGGTCTTGGTGGATCCCCTGGAGGAGGTGAAAACATCATCAATACCAGCAAACTGCAGCACCTTCTTGGGAACCCTAGCCGCCACAATCCCG
GAACCCCTAGGCGCGGGAACCATCCTAACGGTAACGGACCCACACTTCCCGGTAACCTTGCACGGAACGGTGTGGGGCTTCCCAATCTTGTTCCCCCAGT
AACCCCTCCTCACGGGAATAACCGAAAGCTTCGCGAGAATAATCGCGCCACGAATTGCGGTGGCCACTTCCTTGCTGCACTTCACGCCTAGACCCACGTG
GCCGTTGTTGTCGCCGACGACCACGAAGGCCTTGAAACGGGGTGGGGCCCACCAGCGTGTCGATGATCTGGTGCTCTTTGATGGGCAGCGAGTGGAGGTA
GATCTGCTCCAGGCTTCGGATTCTTCCTTCCTTCACCAGG