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Detailed information on CNT30688575


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693976Triticum urartuOryza sativa26.5513.7586.47133forward
CNT30194389Triticum urartuSecale cereale87.6287.196.13439forward

Expression of CNT30688575

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MMIQDQEGPVIHLQLESVDEDLMPESAAGG*

>peptide 2 (39 aa)
MFAFGGCGGLTRLPGWGTCGFNDDPGPGGPCDPFTTGVC*

>peptide 3 (82 aa)
LESLTAGCEDRMFRSVGFGFTDVVIAGVWAAGVELCVGIPTVPRFTCGEAPLTGACEVPPNGLALFLPLNQSVDRFAVVEPV*

Sequence

>CNT30688575
CTTGGAGTCATTAACAGCTGGTTGTGAAGACAGAATGTTTAGATCTGTTGGGTTTGGCTTTACAGATGTCGTAATAGCCGGTGTCTGGGCTGCAGGAGTT
GAACTCTGTGTTGGTATTCCCACGGTGCCAAGGTTCACCTGTGGAGAAGCACCTCTAACTGGAGCTTGCGAAGTACCTCCCAATGGACTTGCACTTTTCT
TGCCACTGAACCAATCGGTGGATAGATTTGCCGTCGTTGAACCAGTCTGATTTAGCCCACTTAGACCACCTCCTACAGGTGGCCTCGGCGCAATTCCCTG
AGCAGGGGGGATGTTTGCATTTGGAGGTTGTGGCGGCCTAACAAGATTACCCGGTTGGGGTACTTGTGGATTCAATGATGATCCAGGACCAGGAGGGCCC
TGTGATCCATTTACAACTGGAGTCTGTTGACGAGGACCTAATGCCTGAGTCGGCTGCGGGGGGCTAGTGACACTATTTGGCTGAGGAGCTGCGGTTGGGA
T