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Detailed information on CNT30650744


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727691Rosa chinensisCorchorus capsularis12.9426.4683.05118forward
CNT3071772Rosa chinensisQuercus suber26.7513.6285.66244forward
CNT30488452Rosa chinensisOlea europaea13.9321.0385.83127forward
CNT30564842Rosa chinensisActinidia chinensis35.5333.4781.79324forward
CNT3030662Rosa chinensisTheobroma cacao22.922484.69209forward

Expression of CNT30650744

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MDSIKKRCLHVVEVQHVLLHQHHCSSYLLALTHLLIWLLIALLQTNCIHHIPCYCGT*

>peptide 2 (46 aa)
MSCMETPLPRNSWIRSKSDAFMSLKSNTFFFINTTVPLIFLLSLTF*

Sequence

>CNT30650744
GCATGGGTGTTTAACCTGCATATAAAATTTAAAGCATGTAAAATAGGATGAAGCTGCTACCGTATGCTTCAATGTAGTGCTGTTTAAGTGCTTACCAGTG
GCTGATAAGTTGATGATAGCCAGAATCATTTACAGCAGCGTAAGCTTTGGCCAGCTGCCAAACTGAAGCCTCGATGCCATCTTCTGCTGGAGTGAAAACT
TTGCTGACAGCACCATGATGCTCCCCTTGTGGATGTGGAAGGCTTAACTCAATTGCCAAAGGCTTCAATGTCCCATCTTCTTGTAGCAAGAGGAAAGTTC
TGGTGGCATAGGTCTTTGTCGTTGTTGTGTTTATTCGTCTCAGGGTAAACCCAGGAATTGCAGACAAAATGGACTCGACCGTGTCCAGGAACATCATCTA
ATGTAATCGTCTTGAGGTAAAATTGGCTATGGTGATGGTTTCTGATCATCAAAGCCCCAGGAACTCCCATTGACTCATCCCAGTCAATTGAAACGGTGAA
AGCAGTATCTCCAGCAGTCAAGGATGTAAGGGTTGTAATCCAGTTCTCCAAGCTCAGGTTGAGTAGCACTGATGAGCTGCATGGAAACACCCTTGCCCAG
AAACTCATGGATTCGATCAAAAAGCGATGCCTTCATGTCGTTGAAGTCCAACACGTTCTTCTTCATCAACACCACTGTTCCTCTTATCTTCTTGCTCTCA
CTCACCTTCTGATTTGGCTTCTCATTGCTCTTCTTCAGACAAACTGTATCCATCACATCCCGTGCTACTGTGGAACTTGAGCAGAAACCCATGAAGACTC
AACAGCTGAAGATACAACAATTCAAGACTTAAAAGACTCAAGACTCCCTTAAGGCTCAAGACTGAGCTTGGTGGTTGATGAGAACGGCATATTTATGTAG
AGAAGGCTTTCC