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Detailed information on CNT30727691


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43191|LOX15_SOLTU, E-value = 8e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30488452Corchorus capsularisOlea europaea27.3520.283.61122forward
CNT30650744Corchorus capsularisRosa chinensis26.4612.9483.05118forward

Expression of CNT30727691

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MNPAMARNIIQSYCLEIKLAVMIVFDDESSRKTQGFIPLKCDIKHSFSCC*

>peptide 2 (37 aa)
RHQLNLETAFFLLFAMANCQIGGSFLFLFILNSQSKG*

>peptide 3 (31 aa)
QASVKLGNSFLLAICNGKLPNWGKFSVSIHS*

Sequence

>CNT30727691
CAGGCATCAGTTAAACTTGGAAACAGCTTTCTTCTTGCTATTTGCAATGGCAAATTGCCAAATTGGGGGAAGTTTTCTGTTTCTATTCATTCTTAATTCA
CAATCCAAAGGATAAACCCAGGAATTGCAGACAAAATGAATCCGGCCATGGCCAGGAACATCATCCAAAGTTACTGTCTTGAGATAAAACTGGCTGTGAT
GATAGTTTTTGATGATGAAAGCTCCAGGAAGACCCAGGGATTCATCCCACTCAAATGTGACATAAAACACAGTTTCTCCTGCTGTTAATGGGGTGATCGT
TGTGACCCACTTCTCCAAATATGCTGGCTTCCCAAGCTTTCCTCCCAACCTATTAGCTGAAGCCACGTGTGTTACAATTTAGTTAGAAAAAAAAAAAATC
ATCAAAAATATATTTTCTTCCCCTTACTTGCAAGATTTGGATAAGC