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Detailed information on CNT30488452


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43191|LOX15_SOLTU, E-value = 7e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727691Olea europaeaCorchorus capsularis20.227.3583.61122forward
CNT30650744Olea europaeaRosa chinensis21.0313.9385.83127forward
CNT3023422Olea europaeaPopulus trichocarpa14.931.5883.3390forward

Expression of CNT30488452

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MCRINPRIADKMELAVSRNIFQGDCLDVKLAMVMVSDNESTRNS*

>peptide 2 (37 aa)
MNSIKKRSPYICRVHNILFLQYYSAFNLLSTANTPRLL

>peptide 3 (32 aa)
MKAPGTPRDSFQSKLTSNVTSSSADSDLVQET*

>peptide 4 (70 aa)
MPDPSPRRLMSSSSLYRRSGSGVSPGRLYMLGVGVPCLRRRHDRTYNDVQDKPKNCRQNGVGRVPEHLPR*

Sequence

>CNT30488452
GCATAGTCATAGACTCTGTCCCATTCTTTTAGCATGCCCGACCCATCGCCACGAAGATTGATGAGCTCTTCTTCCCTATATAGGCGTAGTGGTTCGGGCG
TATCACCTGGCAGGCTATATATGCTTGGCGTTGGCGTACCTTGTTTACGAAGAAGACACGATCGTACTTATAACGATGTGCAGGATAAACCCAAGAATTG
CAGACAAAATGGAGTTGGCCGTGTCCCGGAACATCTTCCAAGGTGACTGTCTTGATGTAAAACTGGCTATGGTGATGGTTTCTGACAATGAAAGCACCAG
GAACTCCTAGAGACTCTTTCCAATCGAAATTAACGTCAAATGTAACGTCATCCTCGGCCGACAGTGATCTGGTTCAAGAAACTTGAAGAAAATTTACGAG
AGACGAGAAGGGGAAAGAAGAAGAAGAGGAACAGGAGTCACCGTGAACAGCACTGATGAGCTGCAGTGAAACACCTTTGCCAAAGAGCTCATGAATTCGA
TCAAGAAGCGAAGCCCATATATCTGTCGAGTCCATAACATTCTTTTTCTTCAATACTACTCTGCCTTTAATCTTCTTTCCACAGCCAATACTCCTCGGCT
CCTC